Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1324 ATGCAAAGTATAGGTGGTAATATAGCCATGGACGAAGAAAACGCTTTGGATGTTAACGAAATCTGGCTTCAAGATGAACAAAACCATCTTCTTGGTGTGAGTGATGCCTCTATGTTCTATGCTGATTTCCCTCCTCTTCCAGATTTTCCGTGCATGTCATCCTCTTCGTCATCTTCCTCCACTCCAGCACTTCAAGTCAAGACCACCACGTGCTCCACCACATCTTCATCCTCTACCGCGACGTCATCGTCGTCCTCTACTGTGTCATGGGCAGTTCTGAAGTCCGATGATACAGAGGATAATCTTCGAGTGGAGGAGCCACCGCTGCAGCCGCCACTAACAACCTTGGCCTCCACCACTTCCACTGTTCTCCCTTTCCCGCCTGAAAATTGTGCTGTCGAGATGGAGGAGCCTTTTCCATACATGGACATGTTAGAGATCAACGATTTCTTCAACCCGGCATTAGTTTTTCAAGATGAGGATTGCCCATTAGAAGAATATCCCCAGAATCAGATAGAGAGGCAGCAGGAGCAACATGCAACTACGCTGCAGCAGCAACTAGAGGATCAAGATCTACATATGCTCTCTAATGACAATAACTGTGAAGAAGAGATTCAAGGAAAAGGAGGAAACCCAGATGGGGAAATGAGCGATGTGTTCTTGGAGTGGCTCAAAACGAACAAGGATAGCGTATCTGCAAATGACTTGAGGAACGTGAAGCTCAAAAAATCAACCATAGAGTGTGCTGCTAAGCGCTTAGGAGGAGGAAAAGAAGCCATGAAGCAATTGTTGAAGCTTATTCTTGAATGGGTTCAAACCAGTCATCTTCAAAACAAAAGGCGCTGCAGTAAGGAGAATAATATGAATAACAATAATGATAGTGCGCCTTCATATTTCCTCACAAACCCTAGCTCTAATTCCAACTCAAATATTTTTGGAATACCTCAGTCATGTCCATGGGTTTCTCCTCCGCAGCCTTATGGGACAGATCCGTCGACTATGGTAGCCGTGCCACCACCTTCTTATTCGGTTATTGGGTATCCGGGTGACCCATATGCAAATGGTGCTTCGAATAATATCAATTCTTACCAACCTGCTAGTACTGAATATAACATGTTGGAAGCAGCCCATTCATGGCCTCCATATCAGTTCACGGTTGCTGCCCACTGCAACCAGTCATATGGGGACAATAACGTTCACCAAGCCGGCCCGCCAGTAGCGGCGGGATTTGGCGGCTATGTGAATCAGTATTCATATCATTATTTTCGTGGCGTGGTGGCGGGTGATAAGTTAATGAGGTTAGGTCCCTCGGCGACCAAAGAAGCGAGGAAGAAGAGGATGACGAGGCAGAGAAGGTATTTGACTCATCATAGGAGCCAGAAACACCATAGCCAACTACAGAATCATGATAATAATGACCCACTTGCAAGATTGGGAAGTGATTATAATTGCACCGGAGGTTCTACGAATCCGGCCAATTGGGTGTACTTGGGGTCAATGGCCGGAGGGTCAGCTTCCTTGGTTTCAGTCGTTCCGGCTGAACCCCGGCCGGCTTTGGATCGGACGGTCATGCAAACTCAGAATTATCAAACTAGAGTCCCATCAACAGATCAAAGGCGTCAGAAAGAGGCAGAAACCCACTTGCCAGAACTAGAGGCGAGAGATGGGATTTCTATAGCAATGGAAGACATTGGAACATCTCGTGTTTGGAACATGCGCTACAGATACTGGCCAAACAACAAAAGCAGGATGTATCTGCTCGAGAACACTGGAGATTTCGTGAAGGCGAATGGACTGCAAGAGGGAGACTTCATAGTGTTGTACTCAGATGTCAAGTGTGGCAAATTTTTGATAAGAGGAGTGAAAGTAAGGCAAGCGGTGGGTGGGGCGAAAACAGATCAGAGCAAGAAAGCCGGAAAAATGCAGAAAGGCCTCGCCACAGCGGCGGCTGCTAATATCGACTCGCTGTCACCTCTGAAAAAGTTTAGAAAAGAGGTGAACTGA 2004 0.4676 MQSIGGNIAMDEENALDVNEIWLQDEQNHLLGVSDASMFYADFPPLPDFPCMSSSSSSSSTPALQVKTTTCSTTSSSSTATSSSSSTVSWAVLKSDDTEDNLRVEEPPLQPPLTTLASTTSTVLPFPPENCAVEMEEPFPYMDMLEINDFFNPALVFQDEDCPLEEYPQNQIERQQEQHATTLQQQLEDQDLHMLSNDNNCEEEIQGKGGNPDGEMSDVFLEWLKTNKDSVSANDLRNVKLKKSTIECAAKRLGGGKEAMKQLLKLILEWVQTSHLQNKRRCSKENNMNNNNDSAPSYFLTNPSSNSNSNIFGIPQSCPWVSPPQPYGTDPSTMVAVPPPSYSVIGYPGDPYANGASNNINSYQPASTEYNMLEAAHSWPPYQFTVAAHCNQSYGDNNVHQAGPPVAAGFGGYVNQYSYHYFRGVVAGDKLMRLGPSATKEARKKRMTRQRRYLTHHRSQKHHSQLQNHDNNDPLARLGSDYNCTGGSTNPANWVYLGSMAGGSASLVSVVPAEPRPALDRTVMQTQNYQTRVPSTDQRRQKEAETHLPELEARDGISIAMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVLYSDVKCGKFLIRGVKVRQAVGGAKTDQSKKAGKMQKGLATAAAANIDSLSPLKKFRKEVN 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1324 667 Gene3D - 538 636 IPR015300 -
Lele44g1324 667 SMART B3_2 528 622 IPR003340 GO:0003677
Lele44g1324 667 Pfam B3 DNA binding domain 546 618 IPR003340 GO:0003677
Lele44g1324 667 SUPERFAMILY DNA-binding pseudobarrel domain 542 617 IPR015300 -
Lele44g1324 667 MobiDBLite consensus disorder prediction 444 463 - -
Lele44g1324 667 MobiDBLite consensus disorder prediction 70 89 - -
Lele44g1324 667 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 219 635 IPR044800 GO:0003700
Lele44g1324 667 MobiDBLite consensus disorder prediction 439 474 - -
Lele44g1324 667 ProSiteProfiles B3 DNA-binding domain profile. 559 624 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1324 Lele-ChrLele44 21442141 21444849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1324 20 628 B3 DNA Binding Superfamily AT3G24650 42.051 5.90e-113 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele44g1324 B3 7.5e-11 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1324 44 21442141 21444849 Lele44g1324 44 21442141 21444849 ECH
Lele41g0022 41 168352 171134 Lele44g1324 44 21442141 21444849 hybridization
Lele42g0027 42 201468 204502 Lele44g1324 44 21442141 21444849 hybridization