Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1323 ATGGTTTTTTCTTCCATGCATCCTTATCTTGATCCAGCCAACTGGCAGCAACAACAGCCGACTTATCAGATTGGAAGTAGCAGTGGCCCAGGTTCTCAGCTTCTTCCTCCTCCTCCGCCGCCACTGCCACCTACTCAGTCTCATGGAGCTAGTGGCTCTGGCTCCATCCGACCTGGTTCCATGGCTGATAGGGCTCGGATGGCCAACATATCAATGCCAGAGGCAGCGCTCAAATGCCCTCGCTGCGATTCCACCAATACTAAGTTTTGCTACTTCAACAACTACAACCTCTCTCAGCCTCGCCACTTCTGCAAGACCTGTAGAAGGTACTGGACCCGAGGTGGTGCCCTGAGAAATGTCCCGGTCGGCGGGGGATGCCGGAGGAACAAGAGAAGTAAAGGCACCAGCTCAAAGTCGCCGCAGGTGAGCTCAGATCGCCAGACAGGAAGTGCTACTTCAACCAACTCTGTGTCTTCCAACAGTGCTTCTGCTGCTGATATGGTAGGCCTTTCGCCTCATCTTTCATCGCTGAGGTTCTCGGCTCCTACTTTGCATCAACTCACTGAGTTTGGATCCGGAGAGATGGGGTTGAACTATGGTAATTTGAGTAATCAAATGGGAGGAGTTGGTGACTTAAGTTTCCAGCTAGGAACCGCTTTGGCTGGAGGAGCAAGCAGTAGTGGCAGCTCGATCTTATCCGCCGCCGGGTTAGAGCAGTGGCGGATGTCACAAACACAACAATTTCCCTTCTTAACTGGTTTGGAATCTTCGCCTGATTTGTACCAATTTCAAAGTGGAGCTGCAGTGCCGGGATATGGTGGCGGTGCAAGTCATCAACTCCGACCAAAGGTGCCAACTGGGGGGATAACTCAAGTAGCTTCAGTGAAAATGGAAGACCATAATCATCACCAGGAACTAAATTTGACAAGGCACTTCTTGGGGATGAATAATAATTCAACAAATCATGAGCAGTATCGGAATACTACGGCCGGTAATTCTAATTCTACTGCTGCTAATTGGACTGAGCTTTCTGGGTTTCGCTATTCAACTACTAGCAACAATCCACAGTAG 1071 0.4995 MVFSSMHPYLDPANWQQQQPTYQIGSSSGPGSQLLPPPPPPLPPTQSHGASGSGSIRPGSMADRARMANISMPEAALKCPRCDSTNTKFCYFNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGTSSKSPQVSSDRQTGSATSTNSVSSNSASAADMVGLSPHLSSLRFSAPTLHQLTEFGSGEMGLNYGNLSNQMGGVGDLSFQLGTALAGGASSSGSSILSAAGLEQWRMSQTQQFPFLTGLESSPDLYQFQSGAAVPGYGGGASHQLRPKVPTGGITQVASVKMEDHNHHQELNLTRHFLGMNNNSTNHEQYRNTTAGNSNSTAANWTELSGFRYSTTSNNPQ 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1323 356 MobiDBLite consensus disorder prediction 121 161 - -
Lele44g1323 356 MobiDBLite consensus disorder prediction 135 161 - -
Lele44g1323 356 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
Lele44g1323 356 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Lele44g1323 356 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Lele44g1323 356 MobiDBLite consensus disorder prediction 32 46 - -
Lele44g1323 356 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 60 277 IPR045174 GO:0003700|GO:0006355
Lele44g1323 356 MobiDBLite consensus disorder prediction 19 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1323 Lele-ChrLele44 21430887 21432131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1323 43 325 C2C2-Dof Transcription Factor Family AT3G55370 42.905 1.80e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele44g1323 zf-Dof 1.7e-32 No_clan