Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1314 ATGCAAGATATGGCTGAATTGAAATCAGAAGAGTGTTGTCTAGAGAATAAGCAATCTACTGCTGCCTCTACCTCCTCTATCTCTGAAGGCAGTGCTAGTGCTATACATAAGTCCCCCGGAAGATGTAGTCCAGCATCAACATCACCCTCCCATCGGAGGACCACTGGCCCCATCAGGCGTGCAAAGGGCGGTTGGACAGCCCAGGAGGATGAGACATTGAGGAATGCTGTTGCTGCTTTCAAGGCCAAGAGTTGGAAGAAAATAGCTGAGTATTTTCCTGATAGATCAGAAGTGCAATGTCTGCACAGATGGCAAAAGGTTCTTAATCCTCAACTTGTTAAAGGTCCTTGGACTCCTGAGGAGGATGACAAAATTGTTGAACTGGTATCAAATTATGGGCCAGCAAAATGGTCTATGATAGCTAAATCTTTGCCTGGTCGCATCGGGAAACAGTGTCGAGAGCGATGGCACAATCATCTTAATCCTGAAATAAAGAAGGAGGCCTGGACTTTGGAGGAAGAGCTGGCCCTCATGGATGCTCATCACATACATGGGAACAAGTGGGCTGAAATAGCTAAGGTTTTACCTGGAAGGACTGATAATGCAATAAAGAATCACTGGAATAGTTCATTGAAGAAAAAATTAGAATTTTATTTAGTTACAGGAAACCTTCCACCAATCCAAAAGAACAATGCACAAGGTGGTGTGAAAGATACAATAAGATGCTCTGCTAGTAAAACTGTACATGCTTGCTCAAGTAAAGTATTAGATACAGCTGATGATACATCATCTACAGACAATACTAAAGATAGCAGTGGAAAGAATCAACTAGAGTCCTTGGCAACAGTGAGAGAGTTTGGTAATTATCTGAGCGTTCCTGCAAATGAAGGTGCTGATTCTGACGTTGTAGAATGGAAGTCCATATCATCCAATCTAGATCTCGGCTACAGCAACTCAGAACCAGTGTCAATGGATAATTTTGGATTGACCAGTGACCTCAAATTTGATAACACTGGACTGAATGGCAAGCCTAAAGTTGAGAATTTTGTGAATAATGGCGAAATGAGCTGTAGCAGGCTAATTAATACATCTTTTTCACAGCATAGTCCAGCCTCTGTTTCTTTGTGTTATGAGCCTCCATTGTTGGAGAGCTCGGTTCCTTTAGATTCCATTGATTTAAGTATGTATTGCCTGCCGAACGAGTACAATGCTACTGCAGTGATGTCACCTGTTGGTTTCTTCACTCCACCTTGTGTGAAGGGCAGTGAATTTTGCACGGAGACTCCGGAATCAATATTGAAAATGGCTGCTAAAACTTTCCCATATACTCCTTCCATATTGAGGAAGAGAAAGAATAGAGTCCAAGCACATGTAACTCCTTATAAAGTTGTGAAAGTGGATGATGGATTTCATACTCCTAATGGACAGGAGGAAACCAAGTATAATGCTGGTTCTGGGTATGGAGAGCTCTGTGAGAGTCCGGCAAGGGATGACAGTCTAAATAATAAGGCTTTCAATGCTTCTCCCCCTTACCGTTTAAGATTCAAGCGAAAAGCATTTGTCAAGTCAGTGGAGAAACAACTTCAGTTTGCTTTTGATCAAGAGAAGCATGATGGCAACAAAATGGAAAAATCTGCTAGGAGCACTGCGATGGCTAGAGATTGTTTGCCTGAAAGGGAAGTGGCAGTGACCTAG 1695 0.4248 MQDMAELKSEECCLENKQSTAASTSSISEGSASAIHKSPGRCSPASTSPSHRRTTGPIRRAKGGWTAQEDETLRNAVAAFKAKSWKKIAEYFPDRSEVQCLHRWQKVLNPQLVKGPWTPEEDDKIVELVSNYGPAKWSMIAKSLPGRIGKQCRERWHNHLNPEIKKEAWTLEEELALMDAHHIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLEFYLVTGNLPPIQKNNAQGGVKDTIRCSASKTVHACSSKVLDTADDTSSTDNTKDSSGKNQLESLATVREFGNYLSVPANEGADSDVVEWKSISSNLDLGYSNSEPVSMDNFGLTSDLKFDNTGLNGKPKVENFVNNGEMSCSRLINTSFSQHSPASVSLCYEPPLLESSVPLDSIDLSMYCLPNEYNATAVMSPVGFFTPPCVKGSEFCTETPESILKMAAKTFPYTPSILRKRKNRVQAHVTPYKVVKVDDGFHTPNGQEETKYNAGSGYGELCESPARDDSLNNKAFNASPPYRLRFKRKAFVKSVEKQLQFAFDQEKHDGNKMEKSARSTAMARDCLPEREVAVT 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1314 564 SUPERFAMILY Homeodomain-like 59 115 IPR009057 -
Lele44g1314 564 MobiDBLite consensus disorder prediction 40 54 - -
Lele44g1314 564 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 165 215 IPR017930 -
Lele44g1314 564 MobiDBLite consensus disorder prediction 535 564 - -
Lele44g1314 564 Gene3D - 61 112 - -
Lele44g1314 564 Gene3D - 113 166 - -
Lele44g1314 564 Gene3D - 167 234 - -
Lele44g1314 564 Pfam Myb-like DNA-binding domain 117 175 - -
Lele44g1314 564 Pfam Myb-like DNA-binding domain 62 108 IPR001005 -
Lele44g1314 564 SUPERFAMILY Homeodomain-like 112 207 IPR009057 -
Lele44g1314 564 ProSiteProfiles Myb-like domain profile. 161 211 IPR001005 -
Lele44g1314 564 MobiDBLite consensus disorder prediction 19 58 - -
Lele44g1314 564 CDD SANT 116 160 IPR001005 -
Lele44g1314 564 SMART sant 113 162 IPR001005 -
Lele44g1314 564 SMART sant 165 213 IPR001005 -
Lele44g1314 564 SMART sant 61 110 IPR001005 -
Lele44g1314 564 ProSiteProfiles Myb-like domain profile. 57 108 IPR001005 -
Lele44g1314 564 FunFam Transcriptional activator Myb isoform A 114 166 - -
Lele44g1314 564 PANTHER MYB PROTEIN-RELATED 62 147 - -
Lele44g1314 564 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 108 IPR017930 -
Lele44g1314 564 CDD SANT 168 211 IPR001005 -
Lele44g1314 564 FunFam Transcription factor MYB3R-2 167 231 - -
Lele44g1314 564 MobiDBLite consensus disorder prediction 19 33 - -
Lele44g1314 564 FunFam Transcriptional activator Myb isoform A 61 113 - -
Lele44g1314 564 CDD SANT 65 108 IPR001005 -
Lele44g1314 564 ProSiteProfiles Myb-like domain profile. 109 160 IPR001005 -
Lele44g1314 564 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 164 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1314 Lele-ChrLele44 21380649 21384977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1314 1 554 MYB Transcription Factor Family AT3G09370 45.922 1.01e-142 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele44g1314 Myb_DNA-bind_6 8.3e-17 CL0123