Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1313 ATGTTGACTGATCGGTTTCTGCTGGCAATAATTTGTCAAGACTTGATAGAAAAATGTTTTGTTGAAAGATCGTTCATATATCGGTTCAGTATCACGGGCGGTGCTGGTGATTTCTCGTTGGAATTGAATCTTCTTTCGCCTAGTGAGGAAGCAAAACTGGGGAGTGAAAGCTCTGGGTTTTGTCGCTGTTTCTGTTGCGTGGATTGGCTCTTGCGATTCTGGCGCCCCGTCATGGTGGATAACATGGAAATCGATGCACCTTCGGAGTCCCAACCTCTCAAGCCTCGAGATCGAATCATTCGGAGGCTTCTTCAATTTGGAGTTCCCGAGGATCAACTTGATCAGCCTCTCCTCGTTGATTTTATCAAGGATAAAAAGTCGTTAATACCTGAACTAGTATCTGTTATATTACCTACGGATGAGGAAGTCGCTGAAGCAGCGCAAGATTCTAAATTTGGTTCTAAAAAGTCCTCATTGGGTGTAACCATGAAGAAAAGGTTCCATGAAAGCATGGCCTGGTTACAGTGGTTGATGTTTGAGGGTGACCCCGCTGCAGCCCTGAGGAACCTTTCCAAACTGTCCATTGGGCAGCGTGGTGTTTGCGGGGCTGTTTGGGGACATAATGATATAGCATACAGGTGTAGAACATGTGAACACGATCCAACCTGCGCAATCTGTGTACCTTGTTTTGAGAATGGGAATCACGAAGGCCATGATTACTTTGTGATATACACAGGCGGTGGTTGTTGTGACTGTGGAGATGTGACAGCGTGGAAGCGTGAGGGATTCTGCTCAAAGCATAAGGGTGCGGAGCAGATACAACCACTTCCTGAGGAGTTTGCGAATTCTGTGGAACCTGTGCTTAATTCTCTTTTCATGTGTTGGAAAGACAAACTAACATTTGCAGAAACTGTTCCTCCGGAAAACTCTAGATCAAGCAGCACTGTTGTTGAAAGGAAGAAGGCAGCTAATGAGCTAACCTTTGCGATGGTTGATATGCTTATAGAATTTTGCAAGCATAGTGAGAGTTTGCTTAGTTTTGTTGCCAGGATGTTATTCTCTTCTGCTGGTTTACTTGCCATTCTGTTGAAAGCTGAGAGGTTTCTAACCGATGTCGTTGTAAGAAAACTTCATGAGTTACTCCTGAAATTGCTGGGGGAACCTGTTTTCAAGTACGAGTTCGCTAAAGTTTTCCTCACTTACTATCCGACTGTCATAAGTGAGGCTATAAGAGAGTGCAGTGACCTTCCTCTGAAGAGGTATCCATTGCTATCCACGTTCTCTGTGCAGATACTTACAGTGCCCACTCTTACCCCTCGTCTGGTGAAGGAAATGAACCTCCTTACAATGCTGTTGGGATGCTTGGAAGACATTTTCTTTGATTGTGCTGGAGAAGATGGTCGATTACAGGTTGCAAGGTGGGGAAATTTGTATGAGACAACTATACGGGTTGTTGAAGATATTCGATTTGTTATGAGCCATGTGGTGGTTTCCAAATATGTCACCTATGATCAGAAGAATATCTCAAGAACTTGGATGAGACTCCTATCCTTTGTACAAGGGATGAACCCTCAAAAGAGAGAAAATGGTCAACATATAGAAGAAGAAAATGAGAATGTCCATTTACCTTTTGTTTTAGGCTACTCTATTGCTAATATTCATTCTCTTTTGGTGGATGGGGCGTTTTCAGATGCTAGTAAGGGAGAGTTGGACAATGAAATTATTCGGAGCTCAAATAAACAAGAATCAGATGATGGAGACAATTTACGACACGCAAAAGTGGGGCGGCTTTCCCAGGATAGCTCTGCATGTGGTATGACTGGTCGTAATAGTGCCTTGGCTTGTTCTTCAAAGGCTTCTGAGATAAAATCTAATGCCTCTTCTCATCTGGTATTTCCCCATTCTGTCATGTGGTTGATATGTGAGTGTTTAGGGGCCATTGAGAATTGGTTGGAAATTGACAATAAGACTTGGTTACTTCCTAGTATGTCTTCTCCAAACAGTGGTAGCATCTATGACAGTAATCTTTCAGCATTAAAGAGAACATTATCCAATATCAGAAAGGGTAAGATTTTTCGTAGGCTTGCAAGTTCAAGTGAAGATCATGGTAATTGCTTAGCTTCTGACCTGGAAAACAGTGAACATGCAATGAAGGATAGTAAACTGAAAATAAATGGTGAATCTGAGTCAGAAAATACCGATATTTCATCTGGTTTCAATGATAGCACAATGGAAACAGATATTCCTGCAGAATTGGGTGGCCTTCGTTTTTTGGCTTTGTCTGATTGGCCACAAATTGTCTACGATGTTAGTTCGCAAGATATCTCTGTCCACATTCCCTTACATCGGTTACTTTCCATGCTGTTACAAAGGTCACTGGGAAGATATTTTGGTGAATCTGCAATTCCAGATGGGTCTGATGCTTGTTCAACTAATTCATCATCAACAATCTACACTGACTTCTTTGGACATGCTCTACGGAGCAGTCATCCATATGGCTTTTCTTCCTATATAATGGAACATCCCTTGCGCATTAGGGTTTTCTGTGCTCAAGTTCATGCTGGAATGTGGAGGAAAAATGGAGATGCTGCTCTTTTATCTTGTGAATGGTACCGGTCTGTTCGCTGGTCTGAACAAGGGCTGGAGCTTGATCTATTTCTTCTTCAGTGTTGTGCTGCACTAGCTCCGCCAGATCTGTTTGTCAGCAGAATTCTTGAGCGCTTTGGGCTTTCAAGCTACCTATCCTTGAATCTTGAATGCTCAAGCGAGTATGAACCTGTTTTAGTCCAGGAAATGCTCACTCTTTTGATTCAGATATTGAAAGAAAGGCGCTTTTGTGGGCTAAGCACTTCTGAAAGCTTGAGAAGAGAACTTATTTGTAAGTTAGCCATTGGAGATGCCACTCATAGTCAGTTGGTGAAGTCTCTTCCTCGTGATCTCTCCAAGTTTGAGCAGCTTCAAGAGATTTTAGATACAGTTGCTGTATACTCTAACCCAACTGGTTTTAATCAGGGTATGTATTCCCTGCGATGGCCATTGTGGAAAGAATTGGACTTGTATCATCCTCGTTGGAATTCGAAGGATTTACAAGTTGCAGAAGAAAGATATTTACGCTTCTGTAGCATCTCTGCACTAACCACACAGATTCCCCGTTGGACCAAAATTTATCCGCCTCTGGAAGGGATTTCAAGTATAGCCACTTGTAAAGTGGTTCTACAGATAATCCGTGCAGTTCTATATTATGCTGTTTTTACTTTTAAATCAGCTGAATCTCGTGCTCCTGATGCTGTTCTTCTAACTGCACTGCATTTACTGTCATTATCTTTAGATATCTGTCTTCAGCAGAAAGAATTTACTGACAAGAAATTTGATTATGAGACACAAATTCCCATAATAGCTTTGTCTGGAGAAGTTATTGGTGAAAGCTCTGTTTATGGTGTTGGTGAACAGAGCTTGTTATCACTTCTTGTTAATTTGATGGGTTTGCACAGGAAGGAAAGTGCAGACAACTTTGTGGAAGCAGGTGGTGGCAACCTGTCTGCTTTAATTGAAGACTTACTGAAGAAGTTTGCTGAGATTGACAACAGATGCATGAATAAGTTGCAGCAACTTGCCCCTGAAGTTGTTAGTCATATATCTCAATGCCTTCCAAATTTAGACTTAGGTGATGTGGTTTCAGCTTCCGATAGTGAGAAACGCAAGGCAAAAGCCCGGGAGAGGCAGGCTGCTATGTTGGAGAAGATGAGAGCTCAACAATCGAAATTTTTGGCTAATGCTGGTTCCAGTATTGAGGATAGTTCCCAAGTTGATCATGAATATGACTTTGATATTGGAGCTGATGCTGAAGAATCCACGCAAGTTGTTTGTTCTCTTTGCCATGATTACAACTCGAAACTTCCGATATCTTTTCTGATTCTTCTACAGAAATCTAGGCTTGTCAGTTTTGTTGATAGAGGTCCCCCAACGTGGGCACAACTTCGTCGGACAGATAAAGAACATATGTCTGTTTCCAACTTTAAGGCGACAGATACGTTGGCGATGGACTGGACTTCAGGCACTTCAGGGTCTACTTCATCTTCTCGCTTAGCCCAGTTGGTTTTGAATGCTACCAATGAATTGGTCTCTAGTGGGCAGCGTGGGGAAGTCAATGCTTTTTTGCAATATGTAAAGGATCAGTTTCCAACATTGGGAAGTATCCAGCTTCCTGATGCATCGTATGATGAAAAAGAGAAGATTCCATATACTTTTGAGACATTGGAACAGGATATGTACTTCTCCATTTGTGGAGAAATGAGCGATGATAATAAAATTTCTACTTCAGCAGGGGACCCAAACATCGGTAGAGATGCTGGATCTGTCTTGCTTGGAAAATACATAGCTGATATTGCAAGAGACATATCGAAAAACTCTCCAGTATCTGAAAATGTTCAGAGTGAGAATACTTCTGTAGAATCTACTTTGCAGCACAATGCAAACGGTTCTTTTGGCCCAACAGATTGTGATGGGCTTCATCTTTCTTCCTGTGGTCATGCAGTACATCAGGAATGCCTTGATCGTTATTTATCTTCACTGAGGGAAAGGTCTGTCAGAAGAATTGTTTTTGAAGGAGGACATATTGTTGATCCAGACCAGGGTGAATTTCTGTGCCCTGTATGCCGCCGGCTTGTAAACTGTGTCTTGCCTACTATACCTGGAAACTTAGAAAAGCCTTTGAAGCAGCCTACAGGTTTAATTAATGGCTCACTACCTGCTACTGATCCTGTGGCTGCATCAAGTAAAGAGATTTATTCACTCCGCCTTTGGCAAGCCTTGAAGATCTTGCAGTCTGCTGCTAATTCTCTTGGGAAGGACGAATTCCAAAATGCTGTTCCTTTGCGGCAGAAGGATAAAACAGGCCAAAATATTGAGCATTTCTCTCGGATGTTGGCTAAAATGTATGTGCCAAACAAACAAGATAAATTATCAAGATCTGCAAGATTAAATCACTCAATGCTCATGTGGGACACTCTTAAGTACTCCATGATGTCAATGGAGATTGCTGCACGATGTGGAAAAACTTACTTAACTCCAAACTATGCTCTTGGTACCATGTATGAAGAACTTAAGTCTTCGAGTGGATTTATTTTATCCTTGCTGTTGAAACTTGTTCAGAAGTCAAGGAGTAAGAATTCTCTTCATGTGCTTCAAAGATTTAGAGGTCTTCAACTCTTTGCAGAATCTATTTGTTCTGGGGTGTCTGAGAGAGATGATATGTTATCTATCTTGAAACATGTTGAAGGGGACCCATCTAATTCCGACCTCCTATTTTGGAGGCGAGCTTCTGACCCTGTACTTGCACATGACCCCTTTTCAACCTTGATGTGGATTCTCTTTTGTCTTCCATCCCCGTTTTTGTCTTGTGAAGAATCTTTGTTATCCCTTGTGCATGCCTTCTACATAGTAGCTGTAACTCAGGCTATCATTTTGTATTGTGTGAAAACCCAGCATAAATTAAGTGAATTAGGTGTTTCTGATTGCCTAATCACTGACATATATAAGGTTATGGGTGAATCGGGATGCCCTCAGCAGTATTTTGTGTCAAACTATTTTGACCCGAGTGCTGATGTTAAAGATGTAATTAGGAGGTTCACTTTCCCCTATTTGCGAAGATGTGCACTGTTGTGGAAAATACTATATTCTTCTATTCCAGCACCATTCTGCGACGAGCACAATGTATTAGATAGATCATCGAGTTATACAAATGACACAATGGTTGGACCTAATGTTGACATGTTTGAGATTACTAAAATTCAAGAACTTGAGAACATGTTTAAGATTCCTTCCCTTGATGTGGTTCTGAAGGATGAATTTTCAAGATCTTCAGTCTCTATTTGGTGCTGTCAATTCTGCAAGGAATTTGAACTAGCTGGGGTTCAACGTAACATGCATTTAACCCCTGCAGTTCCATTTGAATTGATGAGATTGCCAAATGTTTATCAGGATCTTCTGCAGAGGTGTATCAAACAGCGCTGCCTTGAATGCAAATCTCTTCTTGATGAACCTGCATTGTGCCTGCTGTGTGGTAGATTGTGCTCCCCAAATTGGAAATCTTGCTGCAGGGGAAGTGGTTGCCAAAGACATGCTATAGCCTGTGGAGCGGGTACTGGAGTGTTTCTATTGATTAGGAGGACAACAATCCTACTTCAAAGATCTGCACGTCGAGCACCCTGGCCATCTCCTTACTTGGACTCTTTTGGTGAGGAGGATTTTGAAATGCATCGAGGCAAACCTCTTTACCTGAATGAGGAACGTTATGCTGCGTTGACCTACATGGTTGCTTCTCATGGCCTGGACCGAAGTTCCAAGGTTCTGGGCCAGACTACCATTGGATCCTTCTTGTTTCTGCTTAAGGTTTTAAAGCTTGGCTCCTGTGGGATACTCTACCTTCTGGATGTGGCCGTACAGGATTTCGATGGAAATGAAACAGGATTTTGCCGTTGGCGTAGTGGAGGAGTGGTGGGGATGCTTGATGTCATTATTGCTATCGCTAGTTTGGAGCTTTGTTATCACTCAAGCAAATTCACCATCATTGAGCAGCAGATCAGACACTTCGAAAGAGAACGGTCTACAAATAGAATACAAGCAAGGTCGAATCCTGAGGAACTGAGTTCAAGATTGGCATTAGCTCCTCATGACGTTCAACCTAAAGCTTCATGTATACAGAAAAGAAATAACATGTTTTTGCCTAGTGCTCAAGTAATTAGATCAGCCGCAGATTCACAGGATAACTGA 6771 0.4199 MLTDRFLLAIICQDLIEKCFVERSFIYRFSITGGAGDFSLELNLLSPSEEAKLGSESSGFCRCFCCVDWLLRFWRPVMVDNMEIDAPSESQPLKPRDRIIRRLLQFGVPEDQLDQPLLVDFIKDKKSLIPELVSVILPTDEEVAEAAQDSKFGSKKSSLGVTMKKRFHESMAWLQWLMFEGDPAAALRNLSKLSIGQRGVCGAVWGHNDIAYRCRTCEHDPTCAICVPCFENGNHEGHDYFVIYTGGGCCDCGDVTAWKREGFCSKHKGAEQIQPLPEEFANSVEPVLNSLFMCWKDKLTFAETVPPENSRSSSTVVERKKAANELTFAMVDMLIEFCKHSESLLSFVARMLFSSAGLLAILLKAERFLTDVVVRKLHELLLKLLGEPVFKYEFAKVFLTYYPTVISEAIRECSDLPLKRYPLLSTFSVQILTVPTLTPRLVKEMNLLTMLLGCLEDIFFDCAGEDGRLQVARWGNLYETTIRVVEDIRFVMSHVVVSKYVTYDQKNISRTWMRLLSFVQGMNPQKRENGQHIEEENENVHLPFVLGYSIANIHSLLVDGAFSDASKGELDNEIIRSSNKQESDDGDNLRHAKVGRLSQDSSACGMTGRNSALACSSKASEIKSNASSHLVFPHSVMWLICECLGAIENWLEIDNKTWLLPSMSSPNSGSIYDSNLSALKRTLSNIRKGKIFRRLASSSEDHGNCLASDLENSEHAMKDSKLKINGESESENTDISSGFNDSTMETDIPAELGGLRFLALSDWPQIVYDVSSQDISVHIPLHRLLSMLLQRSLGRYFGESAIPDGSDACSTNSSSTIYTDFFGHALRSSHPYGFSSYIMEHPLRIRVFCAQVHAGMWRKNGDAALLSCEWYRSVRWSEQGLELDLFLLQCCAALAPPDLFVSRILERFGLSSYLSLNLECSSEYEPVLVQEMLTLLIQILKERRFCGLSTSESLRRELICKLAIGDATHSQLVKSLPRDLSKFEQLQEILDTVAVYSNPTGFNQGMYSLRWPLWKELDLYHPRWNSKDLQVAEERYLRFCSISALTTQIPRWTKIYPPLEGISSIATCKVVLQIIRAVLYYAVFTFKSAESRAPDAVLLTALHLLSLSLDICLQQKEFTDKKFDYETQIPIIALSGEVIGESSVYGVGEQSLLSLLVNLMGLHRKESADNFVEAGGGNLSALIEDLLKKFAEIDNRCMNKLQQLAPEVVSHISQCLPNLDLGDVVSASDSEKRKAKARERQAAMLEKMRAQQSKFLANAGSSIEDSSQVDHEYDFDIGADAEESTQVVCSLCHDYNSKLPISFLILLQKSRLVSFVDRGPPTWAQLRRTDKEHMSVSNFKATDTLAMDWTSGTSGSTSSSRLAQLVLNATNELVSSGQRGEVNAFLQYVKDQFPTLGSIQLPDASYDEKEKIPYTFETLEQDMYFSICGEMSDDNKISTSAGDPNIGRDAGSVLLGKYIADIARDISKNSPVSENVQSENTSVESTLQHNANGSFGPTDCDGLHLSSCGHAVHQECLDRYLSSLRERSVRRIVFEGGHIVDPDQGEFLCPVCRRLVNCVLPTIPGNLEKPLKQPTGLINGSLPATDPVAASSKEIYSLRLWQALKILQSAANSLGKDEFQNAVPLRQKDKTGQNIEHFSRMLAKMYVPNKQDKLSRSARLNHSMLMWDTLKYSMMSMEIAARCGKTYLTPNYALGTMYEELKSSSGFILSLLLKLVQKSRSKNSLHVLQRFRGLQLFAESICSGVSERDDMLSILKHVEGDPSNSDLLFWRRASDPVLAHDPFSTLMWILFCLPSPFLSCEESLLSLVHAFYIVAVTQAIILYCVKTQHKLSELGVSDCLITDIYKVMGESGCPQQYFVSNYFDPSADVKDVIRRFTFPYLRRCALLWKILYSSIPAPFCDEHNVLDRSSSYTNDTMVGPNVDMFEITKIQELENMFKIPSLDVVLKDEFSRSSVSIWCCQFCKEFELAGVQRNMHLTPAVPFELMRLPNVYQDLLQRCIKQRCLECKSLLDEPALCLLCGRLCSPNWKSCCRGSGCQRHAIACGAGTGVFLLIRRTTILLQRSARRAPWPSPYLDSFGEEDFEMHRGKPLYLNEERYAALTYMVASHGLDRSSKVLGQTTIGSFLFLLKVLKLGSCGILYLLDVAVQDFDGNETGFCRWRSGGVVGMLDVIIAIASLELCYHSSKFTIIEQQIRHFERERSTNRIQARSNPEELSSRLALAPHDVQPKASCIQKRNNMFLPSAQVIRSAADSQDN 2256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1313 2256 ProSiteProfiles Zinc finger UBR-type profile. 199 269 IPR003126 GO:0008270
Lele44g1313 2256 SUPERFAMILY "Winged helix" DNA-binding domain 952 1038 IPR036390 -
Lele44g1313 2256 FunFam Putative e3 ubiquitin-protein ligase ubr3 201 269 - -
Lele44g1313 2256 Pfam Proteolysis_6 C-terminal 1644 2106 IPR044046 -
Lele44g1313 2256 SMART push_1 199 268 IPR003126 GO:0008270
Lele44g1313 2256 PANTHER UBIQUITIN LIGASE E3 ALPHA-RELATED 121 2125 IPR039164 GO:0061630|GO:0071596
Lele44g1313 2256 CDD RING-H2_UBR1_like 1501 1561 - -
Lele44g1313 2256 Gene3D - 948 1038 IPR042065 -
Lele44g1313 2256 Pfam Putative zinc finger in N-recognin (UBR box) 201 267 IPR003126 GO:0008270
Lele44g1313 2256 Gene3D - 201 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1313 Lele-ChrLele44 21360687 21380157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1313 97 2126 Acyl Lipid Metabolism Gene Families AT5G02310 51.942 0.0 1917
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1313 44 21360687 21380157 Lele37g1313 37 22194043 22197901 CCT
Lele44g1313 44 21360687 21380157 Lele39g0099 39 674188 677155 CCT
Lele44g1313 44 21360687 21380157 Lele40g1147 40 21528300 21535580 CCT
Lele44g1313 44 21360687 21380157 Lele44g1313 44 21360687 21380157 ECH
Lele41g0038 41 257249 274180 Lele44g1313 44 21360687 21380157 hybridization
Lele42g0039 42 276644 293293 Lele44g1313 44 21360687 21380157 hybridization