Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1309 ATGGGTGATCCGTACCCTTATGGGCTGCTCGATTTCCAGCAACTCATATCAGGAAGAACCCACCACCATGACTTGCCGGAGCCACCGTGTGTGGGTCGTGACCATGCCGCTGCTGCAGTAGCCACAACTCCACCACTACCTAACAACTACAACGGCGTTTTCTCTCATGGCTTTGCTACTACCTTTGCTCCTTCAAATCATCATCAAGACTATTCCTCAAGCGTTGTCAATATTATTCCCACCTCCACAAACCCTACTGTTACTGCTTCTTCTTCTTTAGTAAACCATGGCACTACCGCTGCATTCTGTAGCAGCAGCAGTAGCATGGAAGCTGCAGAAAAGGGATGGCTTGGATTTGATGCTATGGCGAACAATAGATGGCCGAGACAAGAGACTCTTTTGCTCTTAGAGATCAGATCTCGTCTTGATTCAAAGTTCAGAGAGACCAATCACAAAGCCCCCTTATGGAATGAAATTTCTAGGATAATGAGTGAAGAATATGGCTACCAAAGAAGTGGGAAAAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACCAAGGAAGGGAAAGCAGGAAGACAAGAAGGGAAACACTACAGATTCTTTCGTCAGCTTGAAGCAATATGTGGAGAATCAGCAACGAAGAATATTGCTACTTCTGCTAATTACCAACCTCCATTAATGACCTTCACAGATGGCGAAGTTCTTCATCACAACATCAAGTACTGCTCAAAGACGGGCCTCAGTCTGTCAAACAATTCATCAGACCAGTTCGAGACATCGTCGTCTGAAAACAATGATGACAAGGACCTGTCGGCCATAACCTATATGATGAAGCAAAAACAGGTGGATCAGGTAGACCCGCAAAGAGAGAGTGGAAGAATGAGGGTGAAGAAGAGCTTGAGAGTTGAGGTTGAAGAGATTGTGGACTCTCACATGAGGAAGATGATAGAGAGTCAAGACTCTTGGATGGAGAAGATGATGAGTGTAGTTGAGCATAGAGAGCAAGAAATGGTGTATAAGGAACAAGAGAGGAAGAAAGATTCAATAAGATTCGATCAACAAGTGAATCAATTCTGGGCTAAAGAGAGAGCTTGGTTTGCAGAAAGAGACAATGCATTAATGGAGGTCGTGAAGAATCACTTGGGAAAAGAGCTAATAACAACCGATAATCATCATCATGAGCCTATGGTTGAAGAATATGAAGAAGAACCACAAACCAAGAGAACGAGAGCAAGAACAGCTGTGGGTGCACAGAACTGGAGATCTCAGATCTAA 1290 0.4364 MGDPYPYGLLDFQQLISGRTHHHDLPEPPCVGRDHAAAAVATTPPLPNNYNGVFSHGFATTFAPSNHHQDYSSSVVNIIPTSTNPTVTASSSLVNHGTTAAFCSSSSSMEAAEKGWLGFDAMANNRWPRQETLLLLEIRSRLDSKFRETNHKAPLWNEISRIMSEEYGYQRSGKKCKEKFENLYKYYKKTKEGKAGRQEGKHYRFFRQLEAICGESATKNIATSANYQPPLMTFTDGEVLHHNIKYCSKTGLSLSNNSSDQFETSSSENNDDKDLSAITYMMKQKQVDQVDPQRESGRMRVKKSLRVEVEEIVDSHMRKMIESQDSWMEKMMSVVEHREQEMVYKEQERKKDSIRFDQQVNQFWAKERAWFAERDNALMEVVKNHLGKELITTDNHHHEPMVEEYEEEPQTKRTRARTAVGAQNWRSQI 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1309 429 ProSiteProfiles Myb-like domain profile. 125 184 IPR001005 -
Lele44g1309 429 PANTHER FI21293P1 104 388 - -
Lele44g1309 429 CDD GT1 125 191 - -
Lele44g1309 429 Gene3D - 127 189 - -
Lele44g1309 429 MobiDBLite consensus disorder prediction 406 429 - -
Lele44g1309 429 FunFam trihelix transcription factor PTL-like 127 189 - -
Lele44g1309 429 Pfam Myb/SANT-like DNA-binding domain 125 212 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1309 Lele-ChrLele44 21330607 21332850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1309 126 391 Trihelix Transcription Factor Family AT5G03680 47.388 8.29e-70 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele44g1309 Myb_DNA-bind_4 5.7e-20 CL0123