Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1308 ATGGGTGCGTGCTGGAGCAATCGAATCAAGGCCGTGAGTCCTTCAAGTACAGGATTCATTTCAAGAAGTGTCAGCAGCAATGGCTGTGACACGAGCTCAAACAGCAGGAACTCATCATCCTCCATACCCATAACTCCTCGGAGCGAGGGAGAGATCTTACAATCTTCCAATTTGAAGAGCTTCAGCTACAGCGAACTTAAAACAGGCACGAGAAATTTTCGCCCAGATAGTATCATAGGAGAGGGTGGGTTTGGTTCAGTTTTTAAGGGATGGATTGATGAGCACTCGCTTGCTGCAACCAAGCCAGGGGCTGGCATAGTTATTGCTGTGAAGAGACTTAACCAAGATGGTTTCCAGGGTCACAAGGAATGGCTGGCTGAAATCAACTACCTTGGTCAACTGCATCATCCTAATCTTGTCAAGCTGATAGGGTACTGCTTGGAGGACGAGCATCGACTTCTGGCTTATGAATTTATGTCTAGGGGCAGTGTGGAGAATCATTTGTTCAGAAGAGGATCTCATTTTCAGCCACTATCATGGTCTTTGCGAATGAAAATAGCACTTGGGGCTGCCAAGGGTCTTGCATTTCTCCATAGCACAGAACCTAAAGTCATATACCGGGACTTCAAGACTTCTAATATACTTCTCGATACAGATTATAATGCCAAACTTTCTGACTTCGGGTTGGCCAGAGATGGGCCAACCGGTGACAAAAGTCATGTCTCAACTCGAGTCATAGGTACTCATGGATATGCAGCGCCAGAATATCTTGCAACAGGACACCTTACTGCCAAGAGTGATGAATCAAAGGACACGGCAAAATGTTCTGATAAGAAAGAGCATCGTGTGCAAAGCACCAGTGTTAGTTATCATCCGAAGGGCTTACCTGCATCCACAAGAAATCGCGCCGGCCCTGCACAGTCAAATGCCGCTTATCCCAGGCCATCTGCTTCTCCCCTTTTTGCTTAA 969 0.4665 MGACWSNRIKAVSPSSTGFISRSVSSNGCDTSSNSRNSSSSIPITPRSEGEILQSSNLKSFSYSELKTGTRNFRPDSIIGEGGFGSVFKGWIDEHSLAATKPGAGIVIAVKRLNQDGFQGHKEWLAEINYLGQLHHPNLVKLIGYCLEDEHRLLAYEFMSRGSVENHLFRRGSHFQPLSWSLRMKIALGAAKGLAFLHSTEPKVIYRDFKTSNILLDTDYNAKLSDFGLARDGPTGDKSHVSTRVIGTHGYAAPEYLATGHLTAKSDESKDTAKCSDKKEHRVQSTSVSYHPKGLPASTRNRAGPAQSNAAYPRPSASPLFA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1308 322 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Lele44g1308 322 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Lele44g1308 322 Pfam Protein kinase domain 76 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1308 322 ProSiteProfiles Protein kinase domain profile. 73 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1308 322 Gene3D Transferase(Phosphotransferase) domain 1 159 267 - -
Lele44g1308 322 MobiDBLite consensus disorder prediction 264 286 - -
Lele44g1308 322 PANTHER OS01G0588500 PROTEIN-RELATED 34 267 - -
Lele44g1308 322 SUPERFAMILY Protein kinase-like (PK-like) 38 267 IPR011009 -
Lele44g1308 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lele44g1308 322 MobiDBLite consensus disorder prediction 262 322 - -
Lele44g1308 322 MobiDBLite consensus disorder prediction 23 47 - -
Lele44g1308 322 FunFam Serine/threonine-protein kinase BIK1 39 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1308 Lele-ChrLele44 21324791 21327337 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1308 51 267 Glycoside Hydrolase AT3G07070 53.211 5.87e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele44g1308 Pkinase 1e-33 CL0016