Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1303 ATGATGCTACCGGTTAGTCCCGTTCTCCTGTATGAGTGTTTCGTCAAAAGGGTATCAGAATTTGCATTGCATCATCTCCCTCCTCCATTTCTTTTCTGGAAGAATTTGAACTACAGTTTTAATGGCTATCAAGTGCCTGTCATCCCTAGAGGGTCGAGAACAACTAGGGGGAGGGGTACTGTCAAGAAGAAGAGTGAGGGCAATCAGATACAAGCTTTTGAAATTTTGGCTAGTGTAGCCGGCGACTTTCTGCAGGAGAATGAAAACTCCAATTCTGACAATGCCGTGGCCGGAAAGGATCCTGTCGGTTTTGTTGGAATTCACATAAAGGATAAACAAGAGGAAGAAGGAGGGTCTTTTAAGAGTGACCTCTTTGAGCATGGATGTTGCAGTGAGAATGCCTCGGGCTCGGTCTCTAGTTTGCAAGGGAAGCATAATGACCAAAGGGTTGAACGCTGTTCATCTTTTCTTAGCAATCATCTTGAAGGCCAAGGGCAAAATGTTTTTGAGAAGGAAACGGATGGACTGGGACTGATAAAAGAGAATTATGTGAATGAGAAAATTGTTCATGTTACCGGCAGCTCTGCTGGAGTGACAGAACCTGACCACAGGGCCTCTAAAAGGGAAAGTTCAGAAAATTCTGTCGAGAAGCCTTCATTGGAGGGTCTCGTGCATTGTTCTGGTGGTAGGAAATTATTTAATAGAGATGATGACGAAAACTTTGTTAGGTGTACTCAACCAAGCTCCAAGAATAAGAATTTTGGCCCCCTGCCAGATATGCATTTTCAAAGAGCGAACAGTGTTTCTGGTTCCAAAAGTCGTGATGTAGGCCAAAAGTCAAAGAGTGGGAGTTTGTTTGGAAGTGATGACATCATTGATAGAGATAATTATATTCTTGAAAGCTCACAGAGGATGTATCCTTTTAAGAAGAGGAAGTTCTTCAACCAGACCTCATCGTCTACATCCGATCGGGGGTCTCATTGTCATGGCATATCCGATTCTTCTGACACCAGAGTTGATGATGTGAACTGCAGTGCAGCAATTGGAGCATCATCCTCTATAGCTGGAGGTCAACAAGTTTATGCTGGGTCAAGGGATTGTAATGTGAAGCTTAGCATAAAATCTTTTAAAGTCCCAGAGCTTTTTATTGATATCCCTGAAACTGCAACTATTGGTTCATTAAAGAGGACAGTTATGGAGGCAGTGACGGCTATTTTAGGAGATGAACTGCACGTAGGTATTCTTCTTCAGGGAAAGAAGGTCCAAGATGACAGCAAAACCCTAATTCAGACTGGGATTTCTCAAGATGATAAACACCATAGATTGGGGTTCATGTTGGAGCCAAGACATACTAAAATTACACCACCATATAATGAAGACCCTTATTTTCGAACCACTAATTCGCATCGGGATATATCCAGGCAGAAATTCAACCAATTGAAACCTACATCTCTGATGCTACAACAAAGAACTTGTAATGTCTCCCAAGAGCATTCCCTGATTAAATTTGAAAGTTGTGGTGAAGGTGACCTAAACGTGGTCCCCTCTGTAGCGGATACTTCCCCTAACAATACTATGTCAAAGTGCCGTGCTCTAGTTGCAGTTCCGGCTATTAACATGGAGGCACTAGCTGTCATTCCCTTCCGTCGAAAGCCTGGAAATCCTGACTTTGTTCAGCGTCGAATCAGGAGGCCTTTCTCTGTGTTTGAAGTAGAAGCACTGGTTCAGGCGGTTGAAAAACTAGGAACTGGAAGATGGCGTGATGTCAAACAGTGCGCCTTTGACAATGCAAAGCACAGGACTTACGTGGACTTGAAGGATAAGTGGAAGACATTAGTGCACACTGCAAGAATCTCCCCTCAGCAAAGGAGAGGAGAACCTGTTCCTCAGGAGCTCTTGGATAGAGTCTTAGCTGCGCATGCCTATTGGTCTCAACAGCAATGATTTGATCTCAGCTCGATGCCTGGTCCGAAGCCTAATCTAAGCTACGTGAATTGCTCGGATAGGGCAAAACCATCGAGCTATTTGCATGGCGCTACTTTCACCGTAACCCTGCTTCCCTTTTGCTCTTTCTCGTACCTTTCTTTTCCCGCTCCTGCTGCTGTCTGCAGGACTCTTGTGATTCTCTCTGAGTGTATTCTCTGGGTGTGTAATTGGCTCTGTGGGATCCAAAGATTTTTCTTTCTTGAAGAAGGACAATGA 2202 0.4405 MMLPVSPVLLYECFVKRVSEFALHHLPPPFLFWKNLNYSFNGYQVPVIPRGSRTTRGRGTVKKKSEGNQIQAFEILASVAGDFLQENENSNSDNAVAGKDPVGFVGIHIKDKQEEEGGSFKSDLFEHGCCSENASGSVSSLQGKHNDQRVERCSSFLSNHLEGQGQNVFEKETDGLGLIKENYVNEKIVHVTGSSAGVTEPDHRASKRESSENSVEKPSLEGLVHCSGGRKLFNRDDDENFVRCTQPSSKNKNFGPLPDMHFQRANSVSGSKSRDVGQKSKSGSLFGSDDIIDRDNYILESSQRMYPFKKRKFFNQTSSSTSDRGSHCHGISDSSDTRVDDVNCSAAIGASSSIAGGQQVYAGSRDCNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTAILGDELHVGILLQGKKVQDDSKTLIQTGISQDDKHHRLGFMLEPRHTKITPPYNEDPYFRTTNSHRDISRQKFNQLKPTSLMLQQRTCNVSQEHSLIKFESCGEGDLNVVPSVADTSPNNTMSKCRALVAVPAINMEALAVIPFRRKPGNPDFVQRRIRRPFSVFEVEALVQAVEKLGTGRWRDVKQCAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQQQXFDLSSMPGPKPNLSYVNCSDRAKPSSYLHGATFTVTLLPFCSFSYLSFPAPAAVCRTLVILSECILWVCNWLCGIQRFFFLEEGQ 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1303 733 CDD SANT_TRF 564 614 - -
Lele44g1303 733 MobiDBLite consensus disorder prediction 201 215 - -
Lele44g1303 733 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 559 617 IPR017930 -
Lele44g1303 733 MobiDBLite consensus disorder prediction 264 285 - -
Lele44g1303 733 SMART sant 562 615 IPR001005 -
Lele44g1303 733 PANTHER TELOMERIC REPEAT BINDING PROTEIN 34 647 IPR031105 -
Lele44g1303 733 MobiDBLite consensus disorder prediction 243 287 - -
Lele44g1303 733 Gene3D - 554 653 - -
Lele44g1303 733 ProSiteProfiles Myb-like domain profile. 558 613 IPR001005 -
Lele44g1303 733 SUPERFAMILY Homeodomain-like 564 645 IPR009057 -
Lele44g1303 733 MobiDBLite consensus disorder prediction 194 219 - -
Lele44g1303 733 SUPERFAMILY Ubiquitin-like 364 448 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1303 Lele-ChrLele44 21293703 21300749 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1303 44 21293703 21300749 Lele25g1252 25 8364994 8368405 ECH
Lele44g1303 44 21293703 21300749 Lele26g1264 26 8317193 8320701 ECH
Lele44g1303 44 21293703 21300749 Lele27g0831 27 16347726 16351111 ECH
Lele44g1303 44 21293703 21300749 Lele28g1256 28 8351355 8354864 ECH
Lele44g1303 44 21293703 21300749 Lele44g1303 44 21293703 21300749 ECH
Lele41g0048 41 350904 354512 Lele44g1303 44 21293703 21300749 hybridization
Lele42g0048 42 375503 378796 Lele44g1303 44 21293703 21300749 hybridization