Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1302 ATGGATCGGGGTCTTTGGGGTTTTACTGATTCCAGAAGGGAACAACAATTGGGAAATCGATCTGTACCAATTCTGCAGCAGAATCAGAGTTATGAAAATGCCTTCTTTGATCATAGAAGGGAATTTCGTTTCTTACAATCTGATCAATTACCAACCAATATGAATACACCTTCTTCCTCTACCGTGACCAACGAGGAGCATTCTCCGGACGATTGTGATTTTTCTGATGCTGTTCTGAGTTACATAAATCAGATCCTTATGGAAGAAGACATGGAAGATAAGACGTGCATGCTTCAAGATTCTTTGGATCTTCAAGCAGCTGAGAAATCATTCTATGAAGCATTGGGTGAAACGTACCCACCTTCTTCACCTGCACAAAATCGTCCAAGTTATATGATCAATGAAAATGATGGAGGCATGGGAAATAATTTCCCCAGAAATTACAGTGATTATTACAGTAATAACAACTATGGTAATTTCAAAGGACCTTTCATTCATCAGTCCTTGTCTCAAAATCTTAATGAGTTTCCCTCACAACTTATCCGAGGTAACGGCATTTCTCGGTCATCTTACAGCTCTTCGAGCAGTGTTGTAAGTGGTGTGGAAGGGCCTGTGGATTCTCCAAGCAGTAGTTATCGGGTTCCAGATCTGAACAGCGAGAGCCAATCAATATCACAATTTAACAAAGGGGTCGAGGAGGCTAGTAGGTTTCTTCCAAATGGGAACAAGCTGTTTGCTGATTTACGTTTGTCTAATTTATCACCAGAAGAAGCAAGAGCAAGAAGGACTCTAGAAATATCGTCAGCCAAGGTGGATAAAGATGAAGGGGATGATCTTCGCGGCGGGTCGAAGGTAAGAAAGCAGCCACACAGGGGAGATGAAGATGATGAAGAAGAAGAAAAGAGTAGCAAGCAAGCAGCAGTTTATACCGAACCAACACTACGTTCTGTGATGTTTGATCTAGTGCTTCTTTATACTGATGGGGAAGGTAAGAACCATTACATGGCTCGTCGTGAAGCGTTGCAGAACAAGACCATCAAGGCGGTGATGCCAAACGGTGGTCAAGCGACGAAAGCTTCAAACACCGGTAAGGGGCGTGGGAAGAAACAAAATGGGAGAAAGGCGGTGGTGGATTTGAGAACACTTCTGGTTCTGTGTGCGCAAGCCGTTGCAGCAGATGATCATAAGAGTGCACAAGAGTTGCTAAAGCAGATCAGGCAGCACTCAAATCCTTTTGGGGATGGGAATCAAAGGTTAGCACATATCTTTGCCGATGGACTGGATGCGCGCTTGGCTGGCACCGGTAGCCAGATTTACAAAGGACTCGTAAGTAAAAAAAGGTCGGCTGCTGATTTACTGAAAGCCTATCATCTCTACCTTGCAGCATGCCCTTTTAGGAAGATATCTAATTTTTTCTCAAATGTCACAATAAGGACAGCTTCCGAGAATTCAGCGAGGGTCCATATTATAGATTTCGGTATTCTTTTTGGTTTCCAGTGGCCAACTTTCATACAGAGATTGGTAATGAGAACAGGAGGACGACCACCAAAAATCCGAATCACCGGAATAGACTTCCCACAGCCTGGTTTTAGGCCAGCCGAGAGAATAGAAGAAACGGGAAGACGTTTAGCAGATTATGCAAAAGCTTTCAATGTTCCATTTGAGTATGTTGCCGTAGCTAAGAAATGGGAAACTATTACGCTTGAGGAACTCAAGATTGATAGGGATGAGTTCCTGGTTGTGAACTGTTTATATAGAGCCAAGAACTTGTTAGATGAATCTGTGGCAGTGGAGAGTCCGAGGAATGCTTTCCTGAATCTGATAAGGAAGATCAATCCAGATATATTCATTCATGGGATCATCAACGGGGCATTCAACGCGCCTTTCTTTGTCACCAGGTTCAGGGAAGCCTTGTTTCACTACTCATCACTGTTCGATATGCTGGAGACCATCGTGCCTCGAGAGGACTGGGAGAGAATGCTGATAGAGAAGGAGATATTCGGGAGAGAAGCGTTGAACGTGATAGCTTGCGAGGGATGCGAGAGATCGGAGAGGCCGGAGACGTATAGGCAGTGGCAAGCTCGGATTCTAAGAGCAGGGTTTAGACAGATTCCTTTTACTCGAGATCTAGTACAGAGGGCAATGGAGAAAGTGAGGGGTAGTTACCACAAGGATTTTCTGATAGATGAAGACAGCAAGTGGTTGTTACAAGGTTGGAAGGGACGAATCATCTATGCACTTTCTTGTTGGAGACCTTCCTGA 2262 0.4416 MDRGLWGFTDSRREQQLGNRSVPILQQNQSYENAFFDHRREFRFLQSDQLPTNMNTPSSSTVTNEEHSPDDCDFSDAVLSYINQILMEEDMEDKTCMLQDSLDLQAAEKSFYEALGETYPPSSPAQNRPSYMINENDGGMGNNFPRNYSDYYSNNNYGNFKGPFIHQSLSQNLNEFPSQLIRGNGISRSSYSSSSSVVSGVEGPVDSPSSSYRVPDLNSESQSISQFNKGVEEASRFLPNGNKLFADLRLSNLSPEEARARRTLEISSAKVDKDEGDDLRGGSKVRKQPHRGDEDDEEEEKSSKQAAVYTEPTLRSVMFDLVLLYTDGEGKNHYMARREALQNKTIKAVMPNGGQATKASNTGKGRGKKQNGRKAVVDLRTLLVLCAQAVAADDHKSAQELLKQIRQHSNPFGDGNQRLAHIFADGLDARLAGTGSQIYKGLVSKKRSAADLLKAYHLYLAACPFRKISNFFSNVTIRTASENSARVHIIDFGILFGFQWPTFIQRLVMRTGGRPPKIRITGIDFPQPGFRPAERIEETGRRLADYAKAFNVPFEYVAVAKKWETITLEELKIDRDEFLVVNCLYRAKNLLDESVAVESPRNAFLNLIRKINPDIFIHGIINGAFNAPFFVTRFREALFHYSSLFDMLETIVPREDWERMLIEKEIFGREALNVIACEGCERSERPETYRQWQARILRAGFRQIPFTRDLVQRAMEKVRGSYHKDFLIDEDSKWLLQGWKGRIIYALSCWRPS 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1302 753 MobiDBLite consensus disorder prediction 352 366 - -
Lele44g1302 753 MobiDBLite consensus disorder prediction 50 70 - -
Lele44g1302 753 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 291 745 IPR005202 -
Lele44g1302 753 MobiDBLite consensus disorder prediction 264 308 - -
Lele44g1302 753 MobiDBLite consensus disorder prediction 50 65 - -
Lele44g1302 753 Pfam GRAS domain family 379 751 IPR005202 -
Lele44g1302 753 MobiDBLite consensus disorder prediction 352 372 - -
Lele44g1302 753 MobiDBLite consensus disorder prediction 190 226 - -
Lele44g1302 753 ProSiteProfiles GRAS family profile. 370 751 IPR005202 -
Lele44g1302 753 MobiDBLite consensus disorder prediction 264 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1302 Lele-ChrLele44 21291370 21293631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1302 45 752 GRAS Transcription Factor Family AT2G37650 51.918 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele44g1302 GRAS 2.2e-114 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0050 41 361400 363634 Lele44g1302 44 21291370 21293631 hybridization
Lele42g0050 42 381447 383543 Lele44g1302 44 21291370 21293631 hybridization