Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1287 ATGGAATTTAATCGTCAAAGCGCAAAGAAGTTATCAGAGCAGGTAAGATGGAGGCCGGTAGAATCTGGAGCGAGATCTTATACTTGTGCGTTTTGCAAGAAAGGATTCTCAAATGCTCAAGCCCTAGGAGGTCACATGAACTTCCATAGAAGAGAACGAGCAAAGCTCCAACAATCATCTGAAGAAGAAAACTTGCTTTCTCTGGACATCTCCATCAAGAACCCTAGTACTTCTCATGATGATGATGATCAGCCTCCTCCTAATTATAAGCCTTCTAATTCAGAAGAGAAGGTTTTGTTTCAGGGGGATTGTGAAAAACTTCCTTGTAATAATCCCTTTCTTGCTGGGAATAATGAGGAGAACATTGAAATTGATCTTGAGCTTCGTTGA 390 0.4077 MEFNRQSAKKLSEQVRWRPVESGARSYTCAFCKKGFSNAQALGGHMNFHRRERAKLQQSSEEENLLSLDISIKNPSTSHDDDDQPPPNYKPSNSEEKVLFQGDCEKLPCNNPFLAGNNEENIEIDLELR 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1287 129 MobiDBLite consensus disorder prediction 60 74 - -
Lele44g1287 129 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Lele44g1287 129 SUPERFAMILY beta-beta-alpha zinc fingers 23 54 IPR036236 -
Lele44g1287 129 PANTHER OS07G0101800 PROTEIN 14 93 - -
Lele44g1287 129 Gene3D Classic Zinc Finger 4 84 - -
Lele44g1287 129 MobiDBLite consensus disorder prediction 52 95 - -
Lele44g1287 129 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 54 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1287 Lele-ChrLele44 21206296 21207322 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1287 24 64 C2H2 Transcription Factor Family AT3G09290 70.732 4.62e-17 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele44g1287 None None None