Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1283 ATGTCCCAGTCTCTTTGCATCATGTGCTCCTCTGTGGCTCAAACGCTTCCTTGTGCTTCGTTTGCTGCATTATTGGAAACTCAGTTGAATTCGTCTTGGAAAGTCACCGATTGTAGTAAGAGCTGTTCAGTGTACAAGATCACTTCAATTATGGTTTTACTTCGAGGTCACTTTAAGGATTTTGAATTTTTACATATGATGTCTGACACCCCTTGTTATTGTCGAAGGACTTTGACCTGGGCAGGCGGATCCTATGGTAATGTGAAAATCAATGAAGCTGTGGAAAGTATGTGGACGGAGGTGGCTTCTTCAAGTTCTGAAGAGAATTCTGTTAGATTACTCATGACTGAAATGTCTCATCTGAAGTACATATTGGGAGAAGGGGTTGTTGGCAAAATAGCTCTTACTGGGGATCATTGTTGGATTTTATTTGAAGATATTCTAACCGATAAATTCCAGACTAAGTTGATTAATGAGTGTCCATATGAATGGCTTCTTCAATTTGCAGCAGCTATCAAGGTTGCTGAAGACCTGGCATTTGTTGCCAATGTCAAGGAGAAATTCAATTTCTTTCATTGTGTAACGGCAAACACTCCAACTTTGAGTTCAGATGAAAATATTCGGGATTGGTCATTCTCAGCTCTAACAGGTTGTCCTCTGGATAATTCAGATGTATCATCTGTTACAAATAGTATCCTGACACACGAACTTTTTGGTGGCAATTTACTTAATGTAAAGGAATTGAGTTTTCCGTTGGATTCTGAATTACACAAAGCTCTAGGATCTATTGCTAATAGACAAACTTCTGAACCTGAGTCAGAAAATTTTTCTTTTAAGGATACATACAGTACTAGCTCCACGTTGATATCTGGTGACGAAGAGCATGGTCATATTATGGGTTTACAATTTTCCCACAGACAAAAATCAGAATACCTTTTGGATGCTGTTGTTTGCAATTTACGTGGTGCCTCCGATGATTCTTCATCGACGTTGCCAACAGGATTAACTTCTTCCATTCATCCACAAAGTCATTCTGAGGGAAGCACTTTGATAGTAAATAATGCTACTGATTCAAGTAGCCATCTTACATCTGCATTTGGGGCCAACATAGGTGATTGTACTGACCTTCTTACATTGGCATCTCTGGATGAAAATTCAAGCATATTGCTTGATTGGACACAGCAAGAATCTGTTCATGTTCATAAGCATCCCAAGAGTGGACCAAAAATCTATAGTATTGGCAAGAAAAGAGCCGGCGCTGGAAATACACCGAGGCCAAGACCAAGGGACAGACAGTTGATTATGGACCGCATGAAGGAGCTGAGGGAACTTGTCCCAGACGGTGCCAAGTGTAGCATTGACAAACTCTTAGATCGGACCATAAAGCACATGCTGTACTTGAGAGAAATAACAAACCAGGCGGAGAAATTGAACCAATTTAAGCAGAGAGAGGTGCCAGAGTTCAAGAAGCAGAAGATCAATGGCAATCATACCGGGAGGAGCTGCGCAATTGACTTTGGCAGTGAACTCCAAGTATGCCCCATAGTTATAGAAGATCTTGAATGCCCAGGTCACATGCTTATAGAGTTGATATGTAGTGAGCATGGACTTTTCTTGGAGATTGCCCAAGGGATTCGACAATTGGAGCTTACCATACTGAAAGGTGTTTTGGAAAGCAGTTCAAGCACTGCCTGTGCCCGTTTCATTGTTGAGGTTCCCAGAGGCTTTCACAGAATGGATGTTCTATGCCCTTTGTTGCATCTTTTGCAGACTGGAAGAAGCCCTGTTTCAAATAGAATTTGA 1803 0.4121 MSQSLCIMCSSVAQTLPCASFAALLETQLNSSWKVTDCSKSCSVYKITSIMVLLRGHFKDFEFLHMMSDTPCYCRRTLTWAGGSYGNVKINEAVESMWTEVASSSSEENSVRLLMTEMSHLKYILGEGVVGKIALTGDHCWILFEDILTDKFQTKLINECPYEWLLQFAAAIKVAEDLAFVANVKEKFNFFHCVTANTPTLSSDENIRDWSFSALTGCPLDNSDVSSVTNSILTHELFGGNLLNVKELSFPLDSELHKALGSIANRQTSEPESENFSFKDTYSTSSTLISGDEEHGHIMGLQFSHRQKSEYLLDAVVCNLRGASDDSSSTLPTGLTSSIHPQSHSEGSTLIVNNATDSSSHLTSAFGANIGDCTDLLTLASLDENSSILLDWTQQESVHVHKHPKSGPKIYSIGKKRAGAGNTPRPRPRDRQLIMDRMKELRELVPDGAKCSIDKLLDRTIKHMLYLREITNQAEKLNQFKQREVPEFKKQKINGNHTGRSCAIDFGSELQVCPIVIEDLECPGHMLIELICSEHGLFLEIAQGIRQLELTILKGVLESSSSTACARFIVEVPRGFHRMDVLCPLLHLLQTGRSPVSNRI 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1283 600 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 75 173 IPR043561 GO:0003700|GO:0006355
Lele44g1283 600 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 418 467 IPR011598 GO:0046983
Lele44g1283 600 MobiDBLite consensus disorder prediction 400 429 - -
Lele44g1283 600 MobiDBLite consensus disorder prediction 325 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1283 Lele-ChrLele44 21165083 21170981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1283 309 590 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 39.041 9.73e-48 175
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1283 44 21165083 21170981 Lele44g1283 44 21165083 21170981 ECH
Lele41g0070 41 514888 520098 Lele44g1283 44 21165083 21170981 hybridization
Lele42g0071 42 507838 512040 Lele44g1283 44 21165083 21170981 hybridization