LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele44g1283	ATGTCCCAGTCTCTTTGCATCATGTGCTCCTCTGTGGCTCAAACGCTTCCTTGTGCTTCGTTTGCTGCATTATTGGAAACTCAGTTGAATTCGTCTTGGAAAGTCACCGATTGTAGTAAGAGCTGTTCAGTGTACAAGATCACTTCAATTATGGTTTTACTTCGAGGTCACTTTAAGGATTTTGAATTTTTACATATGATGTCTGACACCCCTTGTTATTGTCGAAGGACTTTGACCTGGGCAGGCGGATCCTATGGTAATGTGAAAATCAATGAAGCTGTGGAAAGTATGTGGACGGAGGTGGCTTCTTCAAGTTCTGAAGAGAATTCTGTTAGATTACTCATGACTGAAATGTCTCATCTGAAGTACATATTGGGAGAAGGGGTTGTTGGCAAAATAGCTCTTACTGGGGATCATTGTTGGATTTTATTTGAAGATATTCTAACCGATAAATTCCAGACTAAGTTGATTAATGAGTGTCCATATGAATGGCTTCTTCAATTTGCAGCAGCTATCAAGGTTGCTGAAGACCTGGCATTTGTTGCCAATGTCAAGGAGAAATTCAATTTCTTTCATTGTGTAACGGCAAACACTCCAACTTTGAGTTCAGATGAAAATATTCGGGATTGGTCATTCTCAGCTCTAACAGGTTGTCCTCTGGATAATTCAGATGTATCATCTGTTACAAATAGTATCCTGACACACGAACTTTTTGGTGGCAATTTACTTAATGTAAAGGAATTGAGTTTTCCGTTGGATTCTGAATTACACAAAGCTCTAGGATCTATTGCTAATAGACAAACTTCTGAACCTGAGTCAGAAAATTTTTCTTTTAAGGATACATACAGTACTAGCTCCACGTTGATATCTGGTGACGAAGAGCATGGTCATATTATGGGTTTACAATTTTCCCACAGACAAAAATCAGAATACCTTTTGGATGCTGTTGTTTGCAATTTACGTGGTGCCTCCGATGATTCTTCATCGACGTTGCCAACAGGATTAACTTCTTCCATTCATCCACAAAGTCATTCTGAGGGAAGCACTTTGATAGTAAATAATGCTACTGATTCAAGTAGCCATCTTACATCTGCATTTGGGGCCAACATAGGTGATTGTACTGACCTTCTTACATTGGCATCTCTGGATGAAAATTCAAGCATATTGCTTGATTGGACACAGCAAGAATCTGTTCATGTTCATAAGCATCCCAAGAGTGGACCAAAAATCTATAGTATTGGCAAGAAAAGAGCCGGCGCTGGAAATACACCGAGGCCAAGACCAAGGGACAGACAGTTGATTATGGACCGCATGAAGGAGCTGAGGGAACTTGTCCCAGACGGTGCCAAGTGTAGCATTGACAAACTCTTAGATCGGACCATAAAGCACATGCTGTACTTGAGAGAAATAACAAACCAGGCGGAGAAATTGAACCAATTTAAGCAGAGAGAGGTGCCAGAGTTCAAGAAGCAGAAGATCAATGGCAATCATACCGGGAGGAGCTGCGCAATTGACTTTGGCAGTGAACTCCAAGTATGCCCCATAGTTATAGAAGATCTTGAATGCCCAGGTCACATGCTTATAGAGTTGATATGTAGTGAGCATGGACTTTTCTTGGAGATTGCCCAAGGGATTCGACAATTGGAGCTTACCATACTGAAAGGTGTTTTGGAAAGCAGTTCAAGCACTGCCTGTGCCCGTTTCATTGTTGAGGTTCCCAGAGGCTTTCACAGAATGGATGTTCTATGCCCTTTGTTGCATCTTTTGCAGACTGGAAGAAGCCCTGTTTCAAATAGAATTTGA	1803	0.4121	MSQSLCIMCSSVAQTLPCASFAALLETQLNSSWKVTDCSKSCSVYKITSIMVLLRGHFKDFEFLHMMSDTPCYCRRTLTWAGGSYGNVKINEAVESMWTEVASSSSEENSVRLLMTEMSHLKYILGEGVVGKIALTGDHCWILFEDILTDKFQTKLINECPYEWLLQFAAAIKVAEDLAFVANVKEKFNFFHCVTANTPTLSSDENIRDWSFSALTGCPLDNSDVSSVTNSILTHELFGGNLLNVKELSFPLDSELHKALGSIANRQTSEPESENFSFKDTYSTSSTLISGDEEHGHIMGLQFSHRQKSEYLLDAVVCNLRGASDDSSSTLPTGLTSSIHPQSHSEGSTLIVNNATDSSSHLTSAFGANIGDCTDLLTLASLDENSSILLDWTQQESVHVHKHPKSGPKIYSIGKKRAGAGNTPRPRPRDRQLIMDRMKELRELVPDGAKCSIDKLLDRTIKHMLYLREITNQAEKLNQFKQREVPEFKKQKINGNHTGRSCAIDFGSELQVCPIVIEDLECPGHMLIELICSEHGLFLEIAQGIRQLELTILKGVLESSSSTACARFIVEVPRGFHRMDVLCPLLHLLQTGRSPVSNRI	600

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele44g1283	600	PANTHER	TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED	75	173	IPR043561	GO:0003700\|GO:0006355
	Lele44g1283	600	ProSiteProfiles	Myc-type, basic helix-loop-helix (bHLH) domain profile.	418	467	IPR011598	GO:0046983
	Lele44g1283	600	MobiDBLite	consensus disorder prediction	400	429	-	-
	Lele44g1283	600	MobiDBLite	consensus disorder prediction	325	345	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele44g1283	Lele-ChrLele44	21165083	21170981	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele44g1283	309	590	Basic Helix-Loop-Helix Transcription Factor Gene Family	AT2G27230	39.041	9.73e-48	175

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele44g1283	44	21165083	21170981	Lele44g1283	44	21165083	21170981	ECH
	Lele41g0070	41	514888	520098	Lele44g1283	44	21165083	21170981	hybridization
	Lele42g0071	42	507838	512040	Lele44g1283	44	21165083	21170981	hybridization

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