Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1262 ATGGAATCCATGCCAATGCCAATGAATAATGACAAGCCGATGAAGATGCAGATGAGCTTCTATTGGGGCAAAGATGCCGTAGTTCTCTTCTCTAACTGGCCCAACCACAGTGTTGGCATGTATATCTTAGCCTTCTTCTTCGTCTTCGTTTTGGCCATTCTCTGTGAGCTCCTCTCTAATCAACCTACCCTTAAACGAGGGACAAGCCCTCTCCATGGAGGCTTGTATAAGTCTGTTTTCCATTTCTTTCGTATCAGCTTCTATTATTTGGTGATGCTCGCCGTCATGTCCTTTAACCTCGGCATCTTCATCGCCGCCGTGGCCGGCCACACCTTAGGATTCTTCATCTCCAAGTATCGAGAGATCGACCAGGCCAACCGAGACCAGAATGGGCCCTCCTTGCGTACTCCGAAGGATGCCGACTCCTTTAACTGCAAAGCCTCTGCATTCAACTGTTCAAGATATGTACGCTTCACCAGCTCATTTCGACGACATGTTGAAGGCACGAAATTGAAGTATTAA 522 0.4751 MESMPMPMNNDKPMKMQMSFYWGKDAVVLFSNWPNHSVGMYILAFFFVFVLAILCELLSNQPTLKRGTSPLHGGLYKSVFHFFRISFYYLVMLAVMSFNLGIFIAAVAGHTLGFFISKYREIDQANRDQNGPSLRTPKDADSFNCKASAFNCSRYVRFTSSFRRHVEGTKLKY 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1262 173 Pfam Ctr copper transporter family 18 59 IPR007274 GO:0005375|GO:0016020|GO:0035434
Lele44g1262 173 Pfam Ctr copper transporter family 70 116 IPR007274 GO:0005375|GO:0016020|GO:0035434
Lele44g1262 173 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 8 125 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1262 Lele-ChrLele44 20989635 20991118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1262 20 140 Inorganic Solute Cotransporters AT3G46900 40.164 7.02e-28 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1262 44 20989635 20991118 Lele44g1262 44 20989635 20991118 ECH
Lele41g0089 41 712601 713785 Lele44g1262 44 20989635 20991118 hybridization
Lele42g0092 42 710752 711517 Lele44g1262 44 20989635 20991118 hybridization