Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1253 ATGGAGTGTCACAGGGAAGTGGATGAAAAACCCGTCATTGAGCTCGACAAACCACCCATCGGAGACGTTGGCGGCGGTAGTGGTGACGAGGGTTTAACAGCGTTAGGTGACGGAGGTGGGAGTAGCTCACAGGGGGCTAAAGACAGAGTGAAGGGTCCCTGGTCTCCAGAGGAGGACGCGATACTGAGTCGACTTGTTAGCAAGTTCGGGGCCCGAAATTGGAGCTTAATTGCTCGCGGGATCGCTGGAAGATCCGGCAAGTCTTGCCGGCTCCGGTGGTGTAATCAACTCGACCCAGCGGTGAAGCGCAAGCCCTTTACTGACGAGGAGGATAGGATCATAGTTGCAGCACATGCAATCCATGGGAACAAATGGGCAGCCATAGCCAGACTTCTACCTGGAAGAACAGATAATGCCATTAAGAATCATTGGAATTCTACTTTGAGGCGTCGGGGAATAGAACTTGATAAAGTTAAATTAGAAGCTTGCAACACAATGGATGATGTCAGCTTGGAGAAAGCAAAAGCATCATCAGAAGAAACTCAGTCATGTGGGGATGTTAATTCCTTCAGATCCTCGGAAGGAAGAGATGTCAGTTCTTTGGAGAATATGGAGGATAAATATGAAGACAAAGCACAGACAGAGAGTCAAATGAACCATGAAGTCAAGGATCCACCTACTCTTTTCCGACCTTTAGCACGTATTAGTGCTTTTAGTGTATATAACTCATTGGATGGTTCACAACCTGCAAAATCAACCTTTAGGCCAGTTCCAATGGAAGGACCTCTTTTTCAAGAATCAAAGCCAGGTATTGAAATTTGTAAAATGCTGGATGGAATTTATGGCTGTGACCTATCTGTTCCTAACCACTGTGGCCATGGTTGTTGCACTGGTGTAAGTGGTGAACATGCCAAAAGCTCCTTGTTGGGGCCCGAATTTATTGATTTTTCAGAACCGTCGTCATTCCCAAGTTTTGAGTTGGCGGCCATAGCTACAGACATCAGTAACCTTGCTTGGCTGAAAAGTGGATTGGAGAATAGTAGTGTCAAAATGATGGGTGACTCAACCGGCAGGGTGATATCTCAGGGGTCTCAAGTGAATATTGGCCATTAA 1113 0.4654 MECHREVDEKPVIELDKPPIGDVGGGSGDEGLTALGDGGGSSSQGAKDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGIAGRSGKSCRLRWCNQLDPAVKRKPFTDEEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGIELDKVKLEACNTMDDVSLEKAKASSEETQSCGDVNSFRSSEGRDVSSLENMEDKYEDKAQTESQMNHEVKDPPTLFRPLARISAFSVYNSLDGSQPAKSTFRPVPMEGPLFQESKPGIEICKMLDGIYGCDLSVPNHCGHGCCTGVSGEHAKSSLLGPEFIDFSEPSSFPSFELAAIATDISNLAWLKSGLENSSVKMMGDSTGRVISQGSQVNIGH 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1253 370 Pfam Myb-like DNA-binding domain 54 111 - -
Lele44g1253 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 152 IPR017930 -
Lele44g1253 370 Gene3D - 50 102 - -
Lele44g1253 370 FunFam Transcription factor MYB44 105 151 - -
Lele44g1253 370 MobiDBLite consensus disorder prediction 1 54 - -
Lele44g1253 370 MobiDBLite consensus disorder prediction 176 197 - -
Lele44g1253 370 SUPERFAMILY Homeodomain-like 48 144 IPR009057 -
Lele44g1253 370 PANTHER MYB PROTEIN-RELATED 51 203 - -
Lele44g1253 370 Coils Coil 201 221 - -
Lele44g1253 370 FunFam MYB transcription factor 51 102 - -
Lele44g1253 370 CDD SANT 53 95 IPR001005 -
Lele44g1253 370 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 101 IPR017930 -
Lele44g1253 370 Gene3D - 105 151 - -
Lele44g1253 370 SMART sant 50 99 IPR001005 -
Lele44g1253 370 SMART sant 102 150 IPR001005 -
Lele44g1253 370 MobiDBLite consensus disorder prediction 174 202 - -
Lele44g1253 370 ProSiteProfiles Myb-like domain profile. 46 97 IPR001005 -
Lele44g1253 370 MobiDBLite consensus disorder prediction 1 16 - -
Lele44g1253 370 CDD SANT 105 148 IPR001005 -
Lele44g1253 370 ProSiteProfiles Myb-like domain profile. 98 148 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1253 Lele-ChrLele44 20928210 20930928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1253 40 370 MYB Transcription Factor Family AT3G09230 50.733 1.44e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele44g1253 Myb_DNA-bind_6 1.1e-15 CL0123