Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1239 ATGTCTTCATTGTTCATTGCTCAGACCTGGAGCGTTTTTCTACCTTACCCTTGTTATTGGATCAAATTGAAGTTGTTACTGACAATTAATTTCCAGGGCTGGGATGATCCTTATGTACCACGCACTCATGAAGGCCTCTCGAAGTGGAAATATCCTGAGATGAATTCGGTTGATTTCCTCTTTGAGGTTGTATCATCGATTGATGATGATGGTGAGAAACTTTTTCTTCATGAACGAGGAAAGAAGAAGCTCATGGAAGGGAATAGGGTAGCATTCAAAGATGGTTCAGATCCCTCATTTTATTCTGGAAAGATTATAGAGTGTTCTTGGGACTCTGATAACCATGAATGGGAATTCATGCGAATGAGAACTGATAAATCAACTCCAAATGAGTTCAATACTTTCAAGAAGGTGATGGGAAGCATAAAAGATAATATTACAGAAGATGTTTTGTTGAACGAGATATCCAAGGTTATTCGCCTTCCCATGTACTCCGACAGGATAAGAATCGACAGTAAAGCGCACCATCATACTAACGCAGCACGGAGAAGTTTCGTTCTCGGCGAGGAGTTGAAGAAGAATGCATTTCGGGAGCGAGAAGCTACTGATGATTCCCTCGGATATCCGGAAATTGACGGCAAGCTTGAAATCGTTGTTCCCTCTTTTGTTCACTACCTTGAAGTTCTTGAAGGTTCTGATGGGGACAAAATGCCAGGAATGAATGATAAGAAATTTTACAGTATGAAAAAGTTGGTGTATGGTGTATCTGAATCAACAGTGCATTCTAGTCCACTTCTATATGACATAGACAAGGATGGGGTGAGAGAGATAGCTTTGGCATCCTTCAATGGTGAAGTGTTGTTTTTCAGGGTCTCCGGCTATATTATGTCAGATAAACTAGTAGTACCTCGTAGGAAAGTGCGCAAAGATTGGTATGCAGGCTTAGATTCTGATCCTGTAGATCGTTCTCATCCTGATGTCCATGATGATCGGCTTGTCCAAGAATCAACTATAATGAAATCTATGTCTCACAGAAATGAAAGTAGACATGAGCTCAACACCTCAGTTACCACATCAACAGACAGTCACCTTGGGGTGGGTAATGTACCCAATTCAGGGTTTGACAAGAAAACAATTGAAAGTAGACATGAATACAACTCTTCGAACATCACATCAACAGAAAGTCAACTTGGCGCAGGGAATGTGTCCAACCCAGAGCCTGTCAAGGGAAAAAATGAAAGTCGAATAGAACAAACTATTAAGATGCCTACCAATGCCGATAATTCATCTTTGAATGCTGGTTCTGTGAAAACTGTTAATGTGGATAATAAAACCAGTACTTCTAGACGTCTTCTGGAAGATAACAACTCAAAAGGAGCAAATGAAGGTAGTTCTGAATCCAATGAGGGTAATAATGAGGGTCTTCATGCTACTACCGTGGAAAATGCTGAAGGTTTGGAAGCAGATGCTGATTCATCCTTTGAGTTATTCCGCAATAGTGATGAGCTGGCTGATGAGTACAGTTATTATTATGATGATTATATTGATGAATCAATGTGGGGTGGTGAAGAATTTGTTGAACAAGAACATGAGAGATTGGAGGATTATGTGAATATTGACTCACACATATTAGGCACTCCTGTCATATCAGATATTGACAATGATGGTGTATCAGAAATGGTTATTGCTGATTCTTATTTCTTTGACCATGAAAACTTTATTGGAAAAGAGGATTACAGGAGAGGAGAATGGATAGCCTCTAAAAGAAATAGCTTTTCCTTCAACATTTCTGCATCTGTATCCTGGCAACAGAATCTATCCCCTAAATTGTTGTATAGAATGGCGAATAATAATGTCCATAACATTTCACTTAATCCTTATCTTGTCTATAGCAACTTGTTGAGATTGAAGTTTTTTCAGAATATCAAGACAGCATACAATTTAATTGCCACTTTTGAAGCTGACAGGTATTATGACAACCAGGATCATATGAAAGAACTGGGTGATATTGATATTGGAAAATACGTTGCTGGTGCTATTGTTGTTTTTAATCTGGACACAAAGCAAGTTAAGTGGTCTACAGAACTTGATCTGAGTACTGATACTGCAAACTTTAGAGCCTACATATATGCTTCTCCGACCGTTGTTGATTTGGATGGTGATGGGAATCTGGACATCCTTGTTGGAACTTCCTATGGCTTGTTCTATGTGTTGGATCATCATGTTGTTGCAGCTGACATTAATGATGATGGCAAGATTGAGCTACTTACTGCTGACACGCATGGAAATGTTGCTGCATGGACTCCCAAAGGAGCTTTAATATGGGAAAATCATCTCAAGAGTCTTATTCCACAGGGTCCAACAATAGGTGATGTTGATGGAGATGGTCATACTGAGTTAGTGGTGCCAACACTATCTGGAAAGATTCATGTTCTTGATGGCAGAGATGGGTCATCTGTTGGACACTATCCATACCGAACTCATGGAAGAGTTATGAATCAAGTTCTTTTAGTCGATTTGAGTAAACATGGGGAGAAAAAGAAGGGATTGACTATTGTTACCTCGTCATTTGATGGTTATCTGTATCTCATTGATGGACCTACTGGATGTGCTGATGTTGTTGACATTGGTGAAACTTCATATAGTATGGTTTTGGCGGACAATGTTGATGGAGGGGATGATCTTGATCTTATCGTCACCACTATGAATGGAAATGCATGGAGACTGCCTAATCAAGGAAGAAATAATGTAGCAAACAGGCACAATCGTCAAGGTATCTATGTGACCCATCCTTCTAGATCTTTCCGGGATGAAGAAGGCAAGAAATTTTGGGTGGAAATTGAGATTGTAGATAAGTACAGATATCCATCTGGGCATCAAGGACCATACAATGTCACTACATCCTTGCTAGTCCCTGGTAATTACCAAGGAGAGAGAACCGTAAAGCAGAGCCAGATCTATCATAACCCAGGGAAATATCGGATTAAGCTTCCAACTGTGGCAGTTAGGACAACAGGAACAGTTTTGGTCGAGATGGTTGACAAGAATGGACTCCATTTCTCTGATGAGTTCTCCCTTACATTCCATATGTACTACTATAAGCTGCTGAAGTGGTTGCTTGTCCTACCAATGCTTGGGATGTTTGGCATACTTGTTATCCTCCGCCCACAAGACGCGATGCCACTTCCATCTTTTTCGAGAAACACTGACTAG 3213 0.4015 MSSLFIAQTWSVFLPYPCYWIKLKLLLTINFQGWDDPYVPRTHEGLSKWKYPEMNSVDFLFEVVSSIDDDGEKLFLHERGKKKLMEGNRVAFKDGSDPSFYSGKIIECSWDSDNHEWEFMRMRTDKSTPNEFNTFKKVMGSIKDNITEDVLLNEISKVIRLPMYSDRIRIDSKAHHHTNAARRSFVLGEELKKNAFREREATDDSLGYPEIDGKLEIVVPSFVHYLEVLEGSDGDKMPGMNDKKFYSMKKLVYGVSESTVHSSPLLYDIDKDGVREIALASFNGEVLFFRVSGYIMSDKLVVPRRKVRKDWYAGLDSDPVDRSHPDVHDDRLVQESTIMKSMSHRNESRHELNTSVTTSTDSHLGVGNVPNSGFDKKTIESRHEYNSSNITSTESQLGAGNVSNPEPVKGKNESRIEQTIKMPTNADNSSLNAGSVKTVNVDNKTSTSRRLLEDNNSKGANEGSSESNEGNNEGLHATTVENAEGLEADADSSFELFRNSDELADEYSYYYDDYIDESMWGGEEFVEQEHERLEDYVNIDSHILGTPVISDIDNDGVSEMVIADSYFFDHENFIGKEDYRRGEWIASKRNSFSFNISASVSWQQNLSPKLLYRMANNNVHNISLNPYLVYSNLLRLKFFQNIKTAYNLIATFEADRYYDNQDHMKELGDIDIGKYVAGAIVVFNLDTKQVKWSTELDLSTDTANFRAYIYASPTVVDLDGDGNLDILVGTSYGLFYVLDHHVVAADINDDGKIELLTADTHGNVAAWTPKGALIWENHLKSLIPQGPTIGDVDGDGHTELVVPTLSGKIHVLDGRDGSSVGHYPYRTHGRVMNQVLLVDLSKHGEKKKGLTIVTSSFDGYLYLIDGPTGCADVVDIGETSYSMVLADNVDGGDDLDLIVTTMNGNAWRLPNQGRNNVANRHNRQGIYVTHPSRSFRDEEGKKFWVEIEIVDKYRYPSGHQGPYNVTTSLLVPGNYQGERTVKQSQIYHNPGKYRIKLPTVAVRTTGTVLVEMVDKNGLHFSDEFSLTFHMYYYKLLKWLLVLPMLGMFGILVILRPQDAMPLPSFSRNTD 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1239 1070 PANTHER - 216 1057 IPR045232 -
Lele44g1239 1070 Gene3D - 642 910 IPR015943 GO:0005515
Lele44g1239 1070 Gene3D - 45 161 IPR012340 -
Lele44g1239 1070 SUPERFAMILY Nucleic acid-binding proteins 53 168 IPR012340 -
Lele44g1239 1070 MobiDBLite consensus disorder prediction 352 367 - -
Lele44g1239 1070 FunFam mRNA-capping enzyme 76 169 - -
Lele44g1239 1070 MobiDBLite consensus disorder prediction 384 402 - -
Lele44g1239 1070 MobiDBLite consensus disorder prediction 341 474 - -
Lele44g1239 1070 MobiDBLite consensus disorder prediction 417 474 - -
Lele44g1239 1070 SUPERFAMILY Integrin alpha N-terminal domain 212 807 IPR028994 -
Lele44g1239 1070 Pfam mRNA capping enzyme, C-terminal domain 54 152 IPR013846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1239 Lele-ChrLele44 20832699 20843018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1239 31 174 Protein tyrosine phosphatase (PTP) family AT3G09100 69.655 4.68e-58 211