Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1217 ATGGTTGGCAATTGCTTCGGTGCTTTGAATTGTTTTAGGGGGAAGAATGGATCTGCTGGCCAGTCAGATGAACAAGTGATTGCAACTAAAACTTTTAGTTACAATTCAATGAGATCAGCCACAGGAGATTTTCATCCATCTAGCAGAATTGGTGGCGGAGGTTATGGAGTTGTCTACAAGGGAGTTTTAAGAGATGGTACTCAAGTTGCTATCAAGTCTCTTTCTGTAGAGTCTAAACAAGGAACAAAGGAATTTATGACAGAAATCGATATTATATCAAAGATACAGCATCCAAACCTTGTGCAACTAATTGGCTGCTGCATTGAGGGTTACCATCGGATGTTGGTGTATGAGTTTTTGGAAAACAATAGCCTTGCCAGTTCTTTGCTTGGTTCCAAAAGCAAATGTGTTGCTCTGGATTGGCCAAAGAGGGCTGCTATCTGTTGTGGTACAGCTTCTGGTCTTGAATTTCTTCATGAAGAAGCCCAACCGAACATTGTTCACAGAGATATCAAGGCTAGCAACATACTGCTTGATGGGAACTTTAATCCTAAAATAGGGGATTTTGGCCTTGCAAAGCTTTTTCCCGACGATGTCACTCATGTTAGTACTCGAGTGGCAGGAACTGTGGGATATCTAGCACCAGAATATGCACTCCTAGGACAACTTACAAAGAAGGCGGATGTGTACAGTTTCGGGATTCTCATGCTTGAAATAATCAGTGGTAAAAGTAGCAGTAAAGCTGCATTTGGAGATAATCTCTTGGTTCTAGTGGAATGGGCTTGGAAGCTGAGAGAAGAAGGCAGGCTTCTGGATATTGTAGATCCCGAACTCATTGAATATGATGAGATGCAGATGTTGCGTTTCATTAAGATTGCTCTGTTCTGTACCCAAGCAGCCGCACAACACAGACCCAACATGAAGCAAGTAACAAAAATGCTCACCAGGGAAGTGCATTTGAATGAGAAGGCATTAACCGAACCTGGAGTTTATAGGTGGAATAGTTCCAAAGAGTATGGCAATTCTTCGTTGGATGAGACATCATCCTCTCAAGCAAACAAGTACAGAAGTTCCAAAAATCCCTACATGACATCAAGCCATTTTAGTGGTGCTGATTTGGATACTCAGATAGTTCCTAGGTGA 1143 0.4199 MVGNCFGALNCFRGKNGSAGQSDEQVIATKTFSYNSMRSATGDFHPSSRIGGGGYGVVYKGVLRDGTQVAIKSLSVESKQGTKEFMTEIDIISKIQHPNLVQLIGCCIEGYHRMLVYEFLENNSLASSLLGSKSKCVALDWPKRAAICCGTASGLEFLHEEAQPNIVHRDIKASNILLDGNFNPKIGDFGLAKLFPDDVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILMLEIISGKSSSKAAFGDNLLVLVEWAWKLREEGRLLDIVDPELIEYDEMQMLRFIKIALFCTQAAAQHRPNMKQVTKMLTREVHLNEKALTEPGVYRWNSSKEYGNSSLDETSSSQANKYRSSKNPYMTSSHFSGADLDTQIVPR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1217 380 MobiDBLite consensus disorder prediction 340 372 - -
Lele44g1217 380 SMART serkin_6 44 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1217 380 Pfam Protein tyrosine and serine/threonine kinase 48 314 IPR001245 GO:0004672|GO:0006468
Lele44g1217 380 MobiDBLite consensus disorder prediction 340 380 - -
Lele44g1217 380 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 29 352 - -
Lele44g1217 380 FunFam Putative LRR receptor-like serine/threonine-protein kinase 120 326 - -
Lele44g1217 380 ProSiteProfiles Protein kinase domain profile. 44 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1217 380 ProSitePatterns Protein kinases ATP-binding region signature. 50 72 IPR017441 GO:0005524
Lele44g1217 380 SUPERFAMILY Protein kinase-like (PK-like) 24 314 IPR011009 -
Lele44g1217 380 CDD STKc_IRAK 63 316 - -
Lele44g1217 380 Gene3D Phosphorylase Kinase; domain 1 12 119 - -
Lele44g1217 380 Gene3D Transferase(Phosphotransferase) domain 1 120 328 - -
Lele44g1217 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Lele44g1217 380 FunFam Receptor-like serine/threonine-protein kinase At4g25390 13 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1217 Lele-ChrLele44 20641703 20645248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1217 27 375 Receptor kinase-like Gene Family AT1G53430 46.439 9.52e-106 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele44g1217 PK_Tyr_Ser-Thr 6.2e-46 CL0016