Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1199 ATGAATAACGTCGATGTTGGTGGCGGCGGTGTCGTCGTCGGCGACAGGTTACCGCAGTGGAGCGTGCAAGAGACGAAGGAGTTTCTGGCGATTCGAGCAGAGTTAGATCAGAATTTCATGGAGACAAAGAGGAACAAGCAGTTATGGCTACTCATCTCTAACACCATGACCGATAAGGGTTACCTTCGAAGCCCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTCGTCACCAGGTACAAGGGATGTGAAACGGCGGAGCCAGAAAGTGTGAGGCAGCAATTCCCATTTTACAACGAGCTTCAAACCATTTTCACAGCGAGGATGCAGAGAATGCTGTGGGCGGAGACGGAAGCAGGAGGAGCGAAGAAGAAGAGGGCAACGGCGGCGGCAACAAACTTGTCGTCAGAAGATGACGAAGAGGACAACGAAGAGATAAGCAATGATCATCATCAGGGAGAGAGAAGCTCGAGGAAGAAGATGAAAAGAAGCAAAAGTTACAGTAGTGGTAACAAGTTTAAGGAGATTCTGGAAGAGTTCATGAGACAACAGATTCAGTTAGAGACACAGTGGATGGAAGCTTTTGAAGCGATGGAGAAAGAGAGACGAATGAAGGAGATGGAATGGAGGCAAGCCATGGAAGCTCTGGAGAATGAGAGGATGATGATGGAGCAGAGATTGAGAGAGAGAGAAGAAGCGAGAAGGATTAGAGAAGAAGCTAGGGCTGAAAGAAGAGACGCTTTAATCACCGCTCTTCTTAACAAGCTATGTAGTTAA 774 0.478 MNNVDVGGGGVVVGDRLPQWSVQETKEFLAIRAELDQNFMETKRNKQLWLLISNTMTDKGYLRSPEQCKCKWKNLVTRYKGCETAEPESVRQQFPFYNELQTIFTARMQRMLWAETEAGGAKKKRATAAATNLSSEDDEEDNEEISNDHHQGERSSRKKMKRSKSYSSGNKFKEILEEFMRQQIQLETQWMEAFEAMEKERRMKEMEWRQAMEALENERMMMEQRLREREEARRIREEARAERRDALITALLNKLCS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1199 257 FunFam Zinc finger and SCAN domain-containing 20 20 81 - -
Lele44g1199 257 Pfam Myb/SANT-like DNA-binding domain 19 102 IPR044822 -
Lele44g1199 257 Gene3D - 20 81 - -
Lele44g1199 257 CDD GT1 18 83 - -
Lele44g1199 257 ProSiteProfiles Myb-like domain profile. 20 76 IPR001005 -
Lele44g1199 257 PANTHER FI21293P1 14 256 - -
Lele44g1199 257 Coils Coil 205 249 - -
Lele44g1199 257 MobiDBLite consensus disorder prediction 117 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1199 Lele-ChrLele44 20498311 20500186 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1199 8 255 Trihelix Transcription Factor Family AT2G38250 55.118 4.29e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele44g1199 Myb_DNA-bind_4 4.2e-19 CL0123