Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1174 ATGGTTCCCTTTCCTTCTACCATCTTCACTAATGATCATGTCCATTGTTCAATTGGTGAAGACAACCTTCAACTTCCATCCTTGACTGATGATTTCTCCATGGATCTTGATGCTTTTGATGCCACTTTGAGTTGTCAAATTCTGGGTATCCATGGATACGCACAAGGAGAAGAAGACATGGAGATGGAGAACCAGTTGAGTCTTCCTCATCTTTTGGAAGCCATTGGAGAAGCATTAGAACTTTCACAGGTTATTCTGAGATGCATCAGCCACAAGGTAAGCCCTGTAAGTGATCCTCTTGAACGTCTGGCATTCTATTTCTCCCAAAATCATGAAACTACAGAGCAGGGGACATTCATTAAACAGGAAGCGCGCAAGATCTTCCATGATGCTTTCAAGGCTATCTACCAAGGCCTGCCACATGGGAGAATTGCTCATTTTGCAGCTAATTCATCAATTATAGGATCTATACCAGCTGACTTAGAATTCATACATATAATAGACTTCGATATGGGAGAAGGCAGTCAATGGCCTCCACTGATGGAGGTCATCGCTCAGCAGCACTTAACTTTGAAACTGATTGCAATCAGATGGGAAGAAGAAAGAACAGATCTTGATTTTGTTTCAACTCAATGGAAATTTGAAGAAAGAACAGATCTTGATTGCAATCAGCATGCCAAATCATGTGGTTTGAAGTTGAAGGTGGAGGAACAGAGTATAGAAGAATTGGTGACAGAGCTCAAGAAATTTAACAAAAGGGGTGGCCATGGAAATGGAAATAGAAATTTCGTGGCCTTCAATTGCATGATCGGTCTCCCACATATGTCTAGGGTTAGAAGTAGAAGCCATGTCTGGGAATTTCTGAGGGTAGCAAATGATTTCATCAAAAGCTCAGCTTCAGACAGGGGAGTCATAGCTTTAGGCGATGGAGAAGCCTGTGAGAAACTCAGAAACAGCGCTAACTTCATGTCATTCTTTAAGGGCCACTTGGTGCATTACCATGCTTTGTTAGAATCCATGGAATCAAATTTCCAATTCCAATTCTCAGAGGCAAGAACAGCGATGGAGAATCTATTCGTGGCGCCATATATATCATGTGAAGATTGGTTTCAGAAGTGGGAGGAGATGAGACAAAACCGGAATCTTCAATCAGAAACAGAGGTTGAAGGTCGAAGCTTGAGGGAAGAGACATTAAGGGAAGTTGCAGAAATGTTGAGAGGAATCGAAGGGTCGTACGAGGTCAAGATTGAAGGCAATAGTGGCAATGAAATGGTTCTTCATTGA 1284 0.4206 MVPFPSTIFTNDHVHCSIGEDNLQLPSLTDDFSMDLDAFDATLSCQILGIHGYAQGEEDMEMENQLSLPHLLEAIGEALELSQVILRCISHKVSPVSDPLERLAFYFSQNHETTEQGTFIKQEARKIFHDAFKAIYQGLPHGRIAHFAANSSIIGSIPADLEFIHIIDFDMGEGSQWPPLMEVIAQQHLTLKLIAIRWEEERTDLDFVSTQWKFEERTDLDCNQHAKSCGLKLKVEEQSIEELVTELKKFNKRGGHGNGNRNFVAFNCMIGLPHMSRVRSRSHVWEFLRVANDFIKSSASDRGVIALGDGEACEKLRNSANFMSFFKGHLVHYHALLESMESNFQFQFSEARTAMENLFVAPYISCEDWFQKWEEMRQNRNLQSETEVEGRSLREETLREVAEMLRGIEGSYEVKIEGNSGNEMVLH 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1174 427 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 65 404 IPR005202 -
Lele44g1174 427 ProSiteProfiles GRAS family profile. 55 427 IPR005202 -
Lele44g1174 427 Coils Coil 233 253 - -
Lele44g1174 427 Pfam GRAS domain family 78 417 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1174 Lele-ChrLele44 20286849 20288254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1174 79 342 GRAS Transcription Factor Family AT4G36710 24.296 2.60e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele44g1174 GRAS 3.4e-24 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1174 44 20286849 20288254 Lele44g1174 44 20286849 20288254 ECH
Lele41g0173 41 1386058 1387614 Lele44g1174 44 20286849 20288254 hybridization
Lele42g0176 42 1449115 1450716 Lele44g1174 44 20286849 20288254 hybridization