Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1173 ATGCTTGATCCCTCTTGGTCGTTGCTCCGTGAAGGCATAAGCTCAACTTTTGATCAAGTTGAGTCTTTTGACTTCAACGTGGATACTCCTTTGTTCCCTGCCATCTTCTCCGATGATCACGTCTATTGTCCAATTGATGACGACAACCTTCAACTCCCATCATTGATTGATGATTTCTCCTTCGATCTTGAAGCTTTTGATGACACTTCGAGTTCTCAATTTCTGGGAATCCATGGATACGCACAAAGTGAGGGAAGCTTTCCTTCAATAAACTTGTGTTGTGAGAGAGAAGATGTTTGGAGTCCAACCCCATCGATGCCATCAGACATGTCTACAGTATTACAAGCACAGCCACTACTGATCATACCAGAAGAAGACATGGAGATGGAGAACCAGTTGAGTCTTCCTCATCTTCTGGAAGCCATTGGAGAAGCCTTAGAGCAAGGACATAAAACACTTGCCCAGGTGATTCTTAGATGCATCAGCCACAAAGTAAGCCCTCTTGGTGATCCCCTTGAACGTCTCGCATTCAATTTGTCCCAAAATCATGAAACCACAGAGCAGGGGACTTTCATCAAACAGGAGGCGTGCAAGAGCTTCCACAACGCTTTCAAGGCTATCTACCAACGCCTGCCACATGGAAGAATTGCCCATTTTGCAGCCCATTCAACAATTCTAGGATCTATACCAGCTAATTCAGAATTCATACATATAATAGACTTTGATATGGGAGAAGGTGTTCAATGGCCTCCATTGATGGAGGCTATCGCTCAACACCACAAAACTTTGAAACTGACATCAATCAGATTGGAAGAAGAGGACACTCTTGATACTGATTGTGTTTCTACTCAATGGAAATTTGAAGAAATCAGAAGGAACCTCAACGAGCATGCCAAATCATGTGGTTTAAAGTTGAAGGTAGAAGAACAGAGTATAGAAGAATTAGTGACAGAGCTCAAGAAATTGAACAAAAGAGGTGGAAAGAGAAATTTCGTGGCCTTCAATTGCATGGTGGGTCTTCCACATATGGGTAGGATCAGAAGTAGGAGACATGTATCGGAATTTCTACAAGTAGCGAAGGATTTCATTAAAAGCTCACCTTTAAACAGGGGAATTATAACTTTTGGCGATGGAGAAGCCTGTGAGAAACTCAGAAACAGCAACAACTTCATGTCATTCTTTAATGGCCATTTGGTGCACTACCATGCTTTATTAGAATCCATGGAATCAAAATTCCCATTCCAATTCTCAGAGGCAACAACAGCTATGGAGAATCTATTCGTGGCGCCATATATATCATGTGAAGATTGGGTTCAGAAGTGGGAGGAGATGAGACAATTGGATCAGAATCTTCAATCAGAAATAGAGTTAGAGAGTCCAAGCTTGAGGGAAGAAACGTTAATGGAAGTCGGAGAAATGTTGAGAGGAATCGATGAAGGATCGTATGAGGTTAAGATTGAAGGCAATAATAGCAATGAAATGGTTTTGGAATGGAAAGGAACTCAACTTGTAAAAATTTCAACGTGGGGGAAACTATCAAATTACTGA 1548 0.416 MLDPSWSLLREGISSTFDQVESFDFNVDTPLFPAIFSDDHVYCPIDDDNLQLPSLIDDFSFDLEAFDDTSSSQFLGIHGYAQSEGSFPSINLCCEREDVWSPTPSMPSDMSTVLQAQPLLIIPEEDMEMENQLSLPHLLEAIGEALEQGHKTLAQVILRCISHKVSPLGDPLERLAFNLSQNHETTEQGTFIKQEACKSFHNAFKAIYQRLPHGRIAHFAAHSTILGSIPANSEFIHIIDFDMGEGVQWPPLMEAIAQHHKTLKLTSIRLEEEDTLDTDCVSTQWKFEEIRRNLNEHAKSCGLKLKVEEQSIEELVTELKKLNKRGGKRNFVAFNCMVGLPHMGRIRSRRHVSEFLQVAKDFIKSSPLNRGIITFGDGEACEKLRNSNNFMSFFNGHLVHYHALLESMESKFPFQFSEATTAMENLFVAPYISCEDWVQKWEEMRQLDQNLQSEIELESPSLREETLMEVGEMLRGIDEGSYEVKIEGNNSNEMVLEWKGTQLVKISTWGKLSNY 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1173 515 ProSiteProfiles GRAS family profile. 126 510 IPR005202 -
Lele44g1173 515 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 127 503 IPR005202 -
Lele44g1173 515 Coils Coil 305 325 - -
Lele44g1173 515 Pfam GRAS domain family 137 509 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1173 Lele-ChrLele44 20279513 20281060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1173 203 509 GRAS Transcription Factor Family AT3G60630 25.000 1.62e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele44g1173 GRAS 4.9e-40 CL0063