Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1172 ATGATCCTGATGGAAAGCCAGAATCTTGATGCTATTATTGGAGACATCACAACTTTGGCACGTCGCACAAAATGGGTTGATTTCACGTTGCCGTATTTAGATTCAAGTGTGGCAATGGTGGTAAGGGTGAAGACGTCCACAATTCAAGTTTACACTGCGAATTTAACCTCAAGTTTAACGCAAGGAAAAAGCAAAGGACCTTCATCTGAGGACGAAAGCGAGATTATTGAAAGTAGGAATTTGTGCGTTCGTGGGATGTCGAAATGGGTCGTGGGTGGGAGGTTTTCTGATTGGAATAGGATTCAATCCGTCTCGGTTAAAGGCTTTAGGAAGTAG 336 0.4315 MILMESQNLDAIIGDITTLARRTKWVDFTLPYLDSSVAMVVRVKTSTIQVYTANLTSSLTQGKSKGPSSEDESEIIESRNLCVRGMSKWVVGGRFSDWNRIQSVSVKGFRK 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1172 111 Coils Coil 106 111 - -
Lele44g1172 111 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 6 46 - -
Lele44g1172 111 Pfam Bacterial extracellular solute-binding proteins, family 3 5 54 IPR001638 -
Lele44g1172 111 SUPERFAMILY Periplasmic binding protein-like II 5 49 - -
Lele44g1172 111 Gene3D - 3 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1172 Lele-ChrLele44 20272066 20272819 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1172 10 44 Ion Channels AT2G29120 54.286 5.08e-08 47.8