Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1166 ATGGGAAACCATAATCGGTTTGCCCAAAAGTTTGCCAGAAATGAAGGAAGAAGACCCATTTCTCGTTTCTTCGTCTCCTTCATTCTGGTTCTTCTTCAAGTTCTCGCATTTACGTTTCAACCAGTCTCAGGAGGAGGAGGACATTCGTGGGATGGTGTGATTGTTGCGCAAGCTGATTACCAGGCTCTGCGAGCTATAAAGCAAGAATTCATCGATTCCAGAGGAGTTCTGAGGAGCTGGAATGACAGTGGAATTGGAGCTTGTTCTGGTAGGTGGGCAGGAATCAAGTGTGTGAAGGGACAGGTTATTGCAATCCAGCTTCCATGGAGGGGATTGGGTGGTCGAATTTCCGAGAAAATAGGAACACTTCAAGCTCTTAGGAAGCTGAGTCTACACGACAATGTATTAGGTGGTCCTGTCCCTTGGTCTCTTGGCTTCCTTCCTAATCTCAGAGGAATCTACCTCTTCAACAATAGGCTTTCAGGTTCTGTTCCTCCTTCCATTGGCAGGATTAGCCCAATGCTTCAATCTATTGATCTTAGCAACAATTCTCTCTCAGGTACTATCCCTCCAAGCTTAGCAAACTCTACTAGATTATATAGACTCAATTTGAGCTTTAACTCTTTTTCTGGGTCTATTCCTAGAACTTTCACTATGGCTCCTTCTTTAACTATTCTTGCTCTTCAACACAACAATCTTTCTGGTTCTATCCCAGATTCTTGGGGTAGTGAAATGGGAAAAAACCAATCTTACCAACTTCAAATCTTGACCCTTGATCACAATCTCATTTCTGGAACCATTCCTGTTTCTTTGAGTAAGATGGGTCCTCTCCAAGAGATTTCTCTGAGCCATAACCGGATTAAAGGGTCTATTCCAAGTGAACTAGGTGGGCTTTCTAGGCTTCAAACTCTTGATCTATCAAGCAATGTCATTAATGGTAGCTTTCCATATAACTTTGACCGTTTAAAAAGCCTTACTGTGCTTAACCTGAAGAATAATAAGCTTGAGGGTGAAATCCCATCAACAATTGGGAACATCTCAGGAATCGCCCAGATCGATTTCTCTGATAATAAACTTGTGGGGGAGATTCCAGATTCACTTACCAAACTTGCAAATTTGACCTCTTTTAATGTTTCTTACAACAATCTCTCTGGCCTTGTCCCAACCCTCCTCTCCAAAAGATTCAATTCTAGCTCTTTTGCAGGGAATCTCCAACTCTGTGGGTATATCCCTTCAAAACCTTGCCCTTCTTCTTCACCCCTCTCTCACAATCCTCCATCTCCATCCCCAAAACCTTCATTGAACCCACACCATCGTAAACTAAGCACCAAGGACATAATCCTCATAGTTGCAGGGGCTCTTCTTGTGATTCTTCTTCTACTTTGCTGCCTTTTGCTTTGTTGTTTGATCAGGAAAAGAGCAGCATCTAAGGAAAAGAATGTGAATAGTGGCAAAACATCGACTGCTGCTACTACAAGAAGTGCAGGAAAAGGAGGTGAAGTTGAATCAGGAGGTGAAGTAGGAGGGAAGCTAGTTCACTTTGATGGACCATTTGTTTTTACCGCTGATGATCTCTTGTGTGCTACTGCTGAGATTATGGGAAAAAGTGCTTATGGAACAGCGTACAAGGCAACATTAGAGGATGGGAACCAGGTTGCTGTGAAGAGGTTGAGGGAGAAGACAACCAAAGGACAGAAGGAGTTTGAAACTGAGGTTGCTTCACTTGGCAAAATTAGACACCCGAACCTGTTGGCACTTAGAGCTTACTATTTGGGGCCAAAGGGAGAGAAGCTTCTTGTCTTTGATTACATGACCAAAGGGAGTCTAGCATCATTCCTCCACGCTCGGGGCCCAGAAATTGTCATAGACTGGCCAACAAGGATGAGAATAGCCCTTGGAGTGACCCGTGGCCTATGTTACCTGCATACACAAGAGAACATAGTACATGGGAATCTCACCTCAAGCAATGTACTCTTGGATGAGCAGACAAACGCCCATATCACAGACTTTGGTCTCTCAAGGCTAATGACCACGTCAGCAAACAGCAACATCATAGCCACTGCAGGAAACCTCGGATACAATGCCCCAGAGCTCACAAAGACCAAGAAACCAAACACAAAAACGGATGTCTATAGCCTTGGTGTCATCATTTTGGAGCTCTTAACTGGAAAACCACCTGGTGAACCTACCAATGGCTTGGATTTGCCACAGTGGGTTGCCTCAATAGTGAAAGAAGAATGGACTAATGAAGTGTTTGATTTGGAGCTCATGAGGGATGCACCAACTATAGGCGATGAACTGCTTAATACTCTGAAATTAGCCCTTCATTGTGTGGATCCATCCCCAGCTGCTAGGCCTGAAGTTCCGCAGATTCTTCAGCAACTGGAAGAGATCAGGCCAGATTCTTCTTCAGTGGATGATGGGGCAAAAGTCCCAGAAACTACTGAGTAA 2451 0.441 MGNHNRFAQKFARNEGRRPISRFFVSFILVLLQVLAFTFQPVSGGGGHSWDGVIVAQADYQALRAIKQEFIDSRGVLRSWNDSGIGACSGRWAGIKCVKGQVIAIQLPWRGLGGRISEKIGTLQALRKLSLHDNVLGGPVPWSLGFLPNLRGIYLFNNRLSGSVPPSIGRISPMLQSIDLSNNSLSGTIPPSLANSTRLYRLNLSFNSFSGSIPRTFTMAPSLTILALQHNNLSGSIPDSWGSEMGKNQSYQLQILTLDHNLISGTIPVSLSKMGPLQEISLSHNRIKGSIPSELGGLSRLQTLDLSSNVINGSFPYNFDRLKSLTVLNLKNNKLEGEIPSTIGNISGIAQIDFSDNKLVGEIPDSLTKLANLTSFNVSYNNLSGLVPTLLSKRFNSSSFAGNLQLCGYIPSKPCPSSSPLSHNPPSPSPKPSLNPHHRKLSTKDIILIVAGALLVILLLLCCLLLCCLIRKRAASKEKNVNSGKTSTAATTRSAGKGGEVESGGEVGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFETEVASLGKIRHPNLLALRAYYLGPKGEKLLVFDYMTKGSLASFLHARGPEIVIDWPTRMRIALGVTRGLCYLHTQENIVHGNLTSSNVLLDEQTNAHITDFGLSRLMTTSANSNIIATAGNLGYNAPELTKTKKPNTKTDVYSLGVIILELLTGKPPGEPTNGLDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPAARPEVPQILQQLEEIRPDSSSVDDGAKVPETTE 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1166 816 SUPERFAMILY L domain-like 96 407 - -
Lele44g1166 816 FunFam Leucine-rich repeat receptor-like protein kinase 512 603 - -
Lele44g1166 816 CDD STKc_IRAK 533 798 - -
Lele44g1166 816 Gene3D Ribonuclease Inhibitor 58 172 IPR032675 -
Lele44g1166 816 Gene3D Ribonuclease Inhibitor 173 246 IPR032675 -
Lele44g1166 816 Gene3D Phosphorylase Kinase; domain 1 533 604 - -
Lele44g1166 816 Gene3D Ribonuclease Inhibitor 251 311 IPR032675 -
Lele44g1166 816 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 245 419 - -
Lele44g1166 816 Gene3D Ribonuclease Inhibitor 312 418 IPR032675 -
Lele44g1166 816 Pfam Protein tyrosine and serine/threonine kinase 531 795 IPR001245 GO:0004672|GO:0006468
Lele44g1166 816 MobiDBLite consensus disorder prediction 795 816 - -
Lele44g1166 816 Pfam Leucine rich repeat N-terminal domain 57 97 IPR013210 -
Lele44g1166 816 PRINTS Leucine-rich repeat signature 322 335 - -
Lele44g1166 816 PRINTS Leucine-rich repeat signature 175 188 - -
Lele44g1166 816 FunFam Pollen receptor-like kinase 1 604 809 - -
Lele44g1166 816 SUPERFAMILY Protein kinase-like (PK-like) 531 800 IPR011009 -
Lele44g1166 816 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 170 244 - -
Lele44g1166 816 SMART LRR_typ_2 274 298 IPR003591 -
Lele44g1166 816 SMART LRR_typ_2 322 346 IPR003591 -
Lele44g1166 816 SMART LRR_typ_2 370 393 IPR003591 -
Lele44g1166 816 SMART LRR_typ_2 147 171 IPR003591 -
Lele44g1166 816 Gene3D Transferase(Phosphotransferase) domain 1 605 811 - -
Lele44g1166 816 MobiDBLite consensus disorder prediction 480 503 - -
Lele44g1166 816 ProSiteProfiles Protein kinase domain profile. 527 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1166 816 FunFam Leucine-rich repeat receptor-like kinase 58 169 - -
Lele44g1166 816 MobiDBLite consensus disorder prediction 480 494 - -
Lele44g1166 816 Pfam Leucine rich repeat 175 233 IPR001611 GO:0005515
Lele44g1166 816 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515
Lele44g1166 816 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 251 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1166 Lele-ChrLele44 20205917 20209112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1166 48 800 Receptor kinase-like Gene Family AT3G51740 67.222 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele44g1166 PK_Tyr_Ser-Thr 4.9e-40 CL0016