Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1162 ATGGCATCTATATGTATATTTTTCATTACTCTTCTTAGTTTGTTTCTTTTGTTATTCTGTCCTAAGTTTATTACAATTAATTCTGGGTCACTTGAGGAGAAGAACAAAAGCATGGCTGAGAAATGGAAGAAAGGTTGTATTAAGACTACGAAGGGGCCATGGATAGTTAAAAAGGTCACTAAAGATGGTTCTGTTAAACAGACTCAACGGTTTCCAAGTGAAAGAGAGAGACAAAACAATAAGCTGAGAGAGAGGAATCGAAGAGCAATGACTCGCAAAATATTTGCTGGTTTGAGAGCTTATGGAAACTATGAGCTTCCTAAACATTCAGACACCAATGACTTGCTCATGGCATTGTGTGAAGAAGCTGGTTGGCATGTTGAACAAGATGGAACCATCTATAGAAAGGAAAAAGATTTAAACTCAGCTCATCAGATGTTTCAACCAAGTCTTACCAATGGTGATATGAAAAATGAACATTTGCAATGTAATAAAGGAGGACAACAAAACTGGTTGAATGGGGAGTCTGAAGGCAATGTTAACCTTGAACTTTCACTCTAG 561 0.3708 MASICIFFITLLSLFLLLFCPKFITINSGSLEEKNKSMAEKWKKGCIKTTKGPWIVKKVTKDGSVKQTQRFPSERERQNNKLRERNRRAMTRKIFAGLRAYGNYELPKHSDTNDLLMALCEEAGWHVEQDGTIYRKEKDLNSAHQMFQPSLTNGDMKNEHLQCNKGGQQNWLNGESEGNVNLELSL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1162 186 Pfam BES1/BZR1 plant transcription factor, N-terminal 69 141 IPR008540 -
Lele44g1162 186 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 67 138 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1162 Lele-ChrLele44 20182077 20184927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1162 81 158 Glycoside Hydrolase AT5G45300 47.561 4.30e-19 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele44g1162 BES1_N 2.7e-35 No_clan