Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1148 ATGGGGAATTGTTGTAGCAACAATCTTCCTCGTCAACATTCATTGGAACAAGAGGTGAATGAGACAGAATTTGAGCATGGAGAGGACCAAAATTCCATTTCCACATACAGTGAAGGTGAAGGGCGAGTCAGGCTAAGAGGACACACTAAGTTTGTGTCAATGTATAGCCAGCAGGGAAGAAAAGGAGTTAATCAAGATGCAATGACATTTTGGGAGGACTTCAATGGAGAAAAAGATGTGATATTTTGTGGTGTGTTCGATGGTCACGGTCCTTTTGGGCACGTGGTTGCTCGATATGTAAGCAAACATTTACCCTCAAAGCTTTCTGCAGCAATCAAAATGCCACAGCAAAAGACCTGCAAGTATAAAAATGCTGCTGCAGAAGGTGAAAATCACCAAGCATTGTCCCTTGCTTCATGGGAGAACACCTTCTTGAAATCCTTCAACGACATGGATCAAGCCATTGCTCGGGACATTAACACCGACAGCTTTTACAGCGGCAGCACTGCGGTGACTGTAATCAAACAGGGTGACCGGCTGATAATTGGCAATTTGGGTGACTCTCGTGCGGTTCTTTGCACAAGAGGAACTAGAGATAAACTCATTCCTGTTCAACTTACTGTTGACTTGAAACCAGATATTCCAAGTGAAGCTGAAAGAATCCGTAGCTATGAAGGCAGAGTTTTCGCTGAAGAAGAAGAGCCTGATGTGTACAGAATGTGGATGCCTGATGAAGATTGCCCTGGACTAGCTATGTCAAGGGCCTTTGGGGACTTTTGCTTAAAAGATTATGGCCTCATCTCAGCTCCCGATGTCTTCTATCGAAGAATAACCAGGCAGGATGAATTTGTGGTTCTGGCCACTGATGGGGTTTGGGATGCACTGACAAATGATGAAGTTATAGAAATAGTTTCTTCAGCACCAAGGAGGTCCAGAGCAGCGAGATTGTTAGTAAAGAGAGCTGTGCAGGCATGGAGGTATAAATTCCCTGGTGCCAAGGTTGATGATTGTGCAGCCATATGTTTGTTTCTGAAAGACCAACCACACTTAACGAAATCTGGAGGAAATTGGCGTCATCACAGGAAGAGTTACTATGAATCTGCTAGAAATGAAGAGGACACCACAAGCTTAGATAGTCCAATGTCAAAGGATGAATGGGTTGCTCTTAAAGGGTTATCGAGAGCCAACTCTATATCCAAACTTACTGGTCTCATCAGGGAAGTGAGCAGGAGGCGTCCATCTGAGTTTCTTGAGGGTGTTCAAATTCACTAG 1272 0.4426 MGNCCSNNLPRQHSLEQEVNETEFEHGEDQNSISTYSEGEGRVRLRGHTKFVSMYSQQGRKGVNQDAMTFWEDFNGEKDVIFCGVFDGHGPFGHVVARYVSKHLPSKLSAAIKMPQQKTCKYKNAAAEGENHQALSLASWENTFLKSFNDMDQAIARDINTDSFYSGSTAVTVIKQGDRLIIGNLGDSRAVLCTRGTRDKLIPVQLTVDLKPDIPSEAERIRSYEGRVFAEEEEPDVYRMWMPDEDCPGLAMSRAFGDFCLKDYGLISAPDVFYRRITRQDEFVVLATDGVWDALTNDEVIEIVSSAPRRSRAARLLVKRAVQAWRYKFPGAKVDDCAAICLFLKDQPHLTKSGGNWRHHRKSYYESARNEEDTTSLDSPMSKDEWVALKGLSRANSISKLTGLIREVSRRRPSEFLEGVQIH 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1148 423 SMART PP2C_4 42 342 IPR001932 -
Lele44g1148 423 PANTHER PROTEIN PHOSPHATASE 38 342 - -
Lele44g1148 423 SUPERFAMILY PP2C-like 47 346 IPR036457 -
Lele44g1148 423 Gene3D - 44 347 IPR036457 -
Lele44g1148 423 CDD PP2Cc 51 344 IPR001932 -
Lele44g1148 423 Pfam Protein phosphatase 2C 58 322 IPR001932 -
Lele44g1148 423 ProSiteProfiles PPM-type phosphatase domain profile. 51 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1148 Lele-ChrLele44 20110676 20113029 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1148 1 349 PP2C-type Phosphatase Gene Family AT5G01700 51.966 5.06e-126 368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1148 44 20110676 20113029 Lele44g1148 44 20110676 20113029 ECH
Lele41g0203 41 1635344 1637833 Lele44g1148 44 20110676 20113029 hybridization
Lele42g0198 42 1630635 1632984 Lele44g1148 44 20110676 20113029 hybridization