Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1143 ATGGAGAGCAGTGCGGAGAAAGAGGCTAATAGTCGAGTGCCACTTTCGGATGTGGTAGCGGATTGTGTTAAGCGGTGGTTTAGGGATACGCTTAAGGAGGCCAAAGCAGGTGACATCAACATGCAAGTGCTGGTTGGTCAGATGTATTGCAGCGGTTATGGAGTTTCCAGAGATGCCCAGAAGGGAAGAATTTGGCTTACCAAGGCATCAAGGACTAGATCTTCAGTTTGGAAAGTTGGTTATAAGCGCCCAGGTTATAATGCGAGTGATTCTGATTCTGATGAATTGAAGGAAGATTCTTAA 303 0.4587 MESSAEKEANSRVPLSDVVADCVKRWFRDTLKEAKAGDINMQVLVGQMYCSGYGVSRDAQKGRIWLTKASRTRSSVWKVGYKRPGYNASDSDSDELKEDS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1143 100 Gene3D Tetratricopeptide repeat domain 6 86 IPR011990 GO:0005515
Lele44g1143 100 SUPERFAMILY HCP-like 32 70 - -
Lele44g1143 100 PANTHER EXPRESSED PROTEIN 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1143 Lele-ChrLele44 20054743 20055650 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1143 44 20054743 20055650 Lele37g1384 37 22621594 22623799 CCT
Lele44g1143 44 20054743 20055650 Lele39g0041 39 307259 312343 CCT
Lele37g1423 37 22907997 22920727 Lele44g1143 44 20054743 20055650 CCT
Lele44g1143 44 20054743 20055650 Lele44g1143 44 20054743 20055650 ECH
Lele41g0210 41 1689072 1690052 Lele44g1143 44 20054743 20055650 hybridization
Lele42g0204 42 1681083 1681991 Lele44g1143 44 20054743 20055650 hybridization