Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1142 ATGATTAGGAATATAGGCAAGTGTATTCATTCATCTATTGGCAAACTGCATCAATTGCTTCTTGAGGAGCGTATTGAGAATGCTTGTGCTGATTCTGGACGTCTTGGGAAATTGAAGAACAGACAATTAAATGGCTCTGCAACTGAATCAATAACTGAGAAAAGTTACATGGAAAAATTCCTGGAATCTCCGTCGCAAGATGGTGATGGTGATGATGATGAAGTGGTTCGTGAAACCTCAATCTCTCCACCTTATGTGAGATTGGTGTCGGATGATACAAGTGAAGATGGGATTAAAATACTTGAAATCAGTACTGTTGGACCTGTAAAAACGTCCTTGGAAAATGAAAGAACATGTTCATGGACAAATGAAGATGAAGCAATACTAAAACCATTCTCAGAAATGCTCAGGGAGAAAAATGGCGATCTCGTGAAGAAGAAGCATGAACAAGGCTCATCTCGTGTGTCAGATGAACAAAACAACAGAGAAAACTTCTTGTATGGGTACCATTCTGATGATTTGACTAGTGAGGCTGACCATCACTTGGATGATTATAAGGATAGAGATAAGAACAGTTTCATGCATATTCAGAAGCCAAAACATTCTGAAGATGAAGAACATCGACAGCGAGATCGATTCTCGCATTCTCAATCATTTGCAGACTCCTTAATGTCCAATTCTCAAGAAGGAACCTCCTTCACATCAGATGGCAATAGTTCACTCACAAGGGATAGAGATGAAGAATATAGCAAAAGGCAAGCTCATTGTTCATATTTTCAATACAATGGAAAATCTTCCACATCAGATGAAAATAGTACTTTCGACAAAGACATTCCTTGTTTCTATTGCTCTGATTCTAACAAATATAACGGGTCTGAGATTGAAGATACATCACCAAAACAGCTTACCCAAATTGTTGAGACACAGAAAACGGATCGAGGCAAGTCTCTCATGCATGATGGTACATATGATCAGGAAAAAGTGATTTCTAGTACAGGAGATGTGTCCTCTGGTTCATATCCAATGAATTCAGGACTTAAATTGATATATTCAGATCTTGCGGCCACTTCAATGATGAAAATGTCTAAAAGGGCTCAGTCAAAGGAAACACCGACTGACCTCATTGAACGTCGATTAAGATTAGCAGATGAAGGCACAAAACACCACACTGAATCTATAGATGCCATTCCTGATGCGTTCTCCCAAATGAAATTTGATGCTGTCGCTACAATATGTTCTGAAAAATATCCTTTGAAAGAATTGGCTGATGGTGACCAATCTGTCAGTTGTAATGCTGTCTTAAAAATTTCAAATGATTTAGAATTAGCTTCTGATGATGAATGCAGTAAATTTTCCAAGATCAAAGGATTGCAAGCAGAATCTTCGAACCAAAACTGTTGTGACATTTTGGTTTGTAGGGAGATTGGTACAGAAGAACTTCCAGTTTGCTCATCCACGGAAGTAGACTTGCATTCTTCAGAAGCTGCAGATGGTACTGAGGCAACACAACTCAACTCACAAGAAAAATCAGACTCAGTGGGAGTCGACGAAGAGCTATCAGAAATGGAGCAGACTGATGAACTGAGTGGATCCACTTGCAGAGTGAATGCAGATGAAGATGATAGTCTTCGTAAAGGTTCATCTTCTGTAGAAGACTATGGTGGGCAGGATTATCATGTCACAGATGATTTGGCTTCTACAACAGAACTTCAGCCAGAAGATCAATCAGTGTATGTTGATGCTGCTGAAGATTATGTGAATATTGCTTCTTGTCTCGCTTCCGGTATGATCTCTTCTGCATCAAGAAATCTTTCAAATTTACAAGAACCTATACCTGGCACATATTCTCCTGAGACGGAAATGGAATCCAATGAGGCAGAACCGATCAAGATTGCTGTTGACTTGAACGCTGAAAAGATGGATAATCAGCAGGAACCATCTTCATATTCCAATATAATATCTTCTTCACTGAGGAGTTTTAGGAATTTTGAGGAAACTAGTTTTTCTTTTGCTGATCCTCAAGAGAAACAGAGGGAAATCAGCGAGGCTATTGACAGAGAATCCTTGACAAAACTAGAGAAACAGAAGGGTGTGCATCAACCAAATGCCGCTTGTGCGAATGTAGAATTGAGCCTGAATAGATCAACGCTCTGTGATAATTCAGAAATATGTAATGGTATTCAAGGTTCATCTCCTAAGGAGCAACTTGAACACAGTTCTGTGAAGGATAAGATTCTCAAGTTTTCAAAGCTAGACTCTCAGGAACCAAAATCCATATTTCGCTTGCAGAGTAAACGTTTACGAAATGGTAAAGATCGTTTACCATCTTCTTCTTTGTCTAACCAGATGGAGTGCGGAAATCATTTAGATAAGTTCTTGCAATCACAACATGGTAAATGGGATGCAGGATTTCTGCCTGGATGTGAAGAAAATTCTTCCTCAAAGAAACCTCAATCTGAACAGATGCAAATATCAAATCACTTGGAAAAGGAAAGAAACTCTCATGCTGCCTCTAAATCTGTTCCTGAAAGTCAGGAACATGTCGTGAACAAGCCTCTTCCTCCCCTTCCGGACCCCTTATCTGAGGCCCCGAAAATCATCTTTGGAGAAATGCCACCTATGCCTCCTCTACCACCTTGTTCTTTATAA 2649 0.3952 MIRNIGKCIHSSIGKLHQLLLEERIENACADSGRLGKLKNRQLNGSATESITEKSYMEKFLESPSQDGDGDDDEVVRETSISPPYVRLVSDDTSEDGIKILEISTVGPVKTSLENERTCSWTNEDEAILKPFSEMLREKNGDLVKKKHEQGSSRVSDEQNNRENFLYGYHSDDLTSEADHHLDDYKDRDKNSFMHIQKPKHSEDEEHRQRDRFSHSQSFADSLMSNSQEGTSFTSDGNSSLTRDRDEEYSKRQAHCSYFQYNGKSSTSDENSTFDKDIPCFYCSDSNKYNGSEIEDTSPKQLTQIVETQKTDRGKSLMHDGTYDQEKVISSTGDVSSGSYPMNSGLKLIYSDLAATSMMKMSKRAQSKETPTDLIERRLRLADEGTKHHTESIDAIPDAFSQMKFDAVATICSEKYPLKELADGDQSVSCNAVLKISNDLELASDDECSKFSKIKGLQAESSNQNCCDILVCREIGTEELPVCSSTEVDLHSSEAADGTEATQLNSQEKSDSVGVDEELSEMEQTDELSGSTCRVNADEDDSLRKGSSSVEDYGGQDYHVTDDLASTTELQPEDQSVYVDAAEDYVNIASCLASGMISSASRNLSNLQEPIPGTYSPETEMESNEAEPIKIAVDLNAEKMDNQQEPSSYSNIISSSLRSFRNFEETSFSFADPQEKQREISEAIDRESLTKLEKQKGVHQPNAACANVELSLNRSTLCDNSEICNGIQGSSPKEQLEHSSVKDKILKFSKLDSQEPKSIFRLQSKRLRNGKDRLPSSSLSNQMECGNHLDKFLQSQHGKWDAGFLPGCEENSSSKKPQSEQMQISNHLEKERNSHAASKSVPESQEHVVNKPLPPLPDPLSEAPKIIFGEMPPMPPLPPCSL 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1142 882 MobiDBLite consensus disorder prediction 216 239 - -
Lele44g1142 882 MobiDBLite consensus disorder prediction 491 510 - -
Lele44g1142 882 MobiDBLite consensus disorder prediction 491 558 - -
Lele44g1142 882 MobiDBLite consensus disorder prediction 533 547 - -
Lele44g1142 882 MobiDBLite consensus disorder prediction 804 882 - -
Lele44g1142 882 MobiDBLite consensus disorder prediction 196 248 - -
Lele44g1142 882 MobiDBLite consensus disorder prediction 196 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1142 Lele-ChrLele44 20047887 20051627 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1142 44 20047887 20051627 Lele37g1385 37 22624776 22626608 CCT
Lele44g1142 44 20047887 20051627 Lele38g1260 38 23397903 23401980 CCT
Lele44g1142 44 20047887 20051627 Lele40g1202 40 21883268 21887771 CCT
Lele44g1142 44 20047887 20051627 Lele44g1142 44 20047887 20051627 ECH
Lele41g0211 41 1693507 1699962 Lele44g1142 44 20047887 20051627 hybridization
Lele42g0206 42 1689067 1695291 Lele44g1142 44 20047887 20051627 hybridization