Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1121 ATGGCCTCACGTAGGTATTTCTGCATGGTTCTTCTTGCGTTGGTAGCATTATCAGCTTTTGCAAGCTCAGCTTTGTCCATAACAACACTATCTCCTAATTTCTATGACCAATCATGTTCCAACGCTTTGAACACAGTTAAGCGCGTCGTTCAGGCTGCAGTTCTGAACGAGACTCGAATGGGGGCTTCCTTGCTTCGTTTACACTTCCATGATTGCTTTGTCAATGGATGTGATGGGTCAGTTCTTTTGGATGCCACCCCAACTATTGACAGCGAGAAGAATGCATTTCCTAACTTGAATTCTGCTCGAGGATTTGAAGTGATTGATGAGATCAAGAAAGAGGTGGACCAAGCATGTGGAGGCCCCGTTGTTTCTTGTGCTGACATCTTGGCTGTTGCAGCTCGTGATTCTGTCGTTGCAGTAAGTGATATTGTATCTCTAGGGGGCCCCACATGGAAGGTGAACCTGGGAAGAAGAGACTCGACCAACGCTAGCCGAGAGGATGCAAACACTAACCTACCAGCACCATTTTTTGATCTGCCTCAGCTCATAGACAGCTTCAAGAAGCAAGGGCTTGATGAAAATGATTTGGTCCTTTTATCTGCTGCCCACACCATTGGATTTGCTAGCTGTGCTACGTTTAGAAACCGCATCTACAACGACTCCAACATCAATCCCTTCTTTGCTGCACAACTCCAAAAGTATGGGCATGTTTGGTTTACAATTTGTCAAACTGAACTAACTTTTGCCAAAAGCTACTTTGACTTGCGTTTACATAACTGTGTCTGCCCTAGAAGTGGAGGCGACAACAACCTTGCAGCGTTGGACTCAACACCTAAAAACTTCGACTTGTCTTACTTTTGGAATTTGGTTCAGAAGAAAGGGCTTCTTCACTCTGATCAAGCTCTCTTCAATGGCGGTTCTACTGATTTCTTGGTTGCACAGTATACAGTAAACCCTCTAGCTTTCTACAAGGGTTTTGCTTCTTCCATGATTAAGATGGGAAATATAAAGCCACTCACTGGGAATCAAGGCCAGATCCGTGTCAATTGCAGAATCGTCAACTGA 1068 0.4466 MASRRYFCMVLLALVALSAFASSALSITTLSPNFYDQSCSNALNTVKRVVQAAVLNETRMGASLLRLHFHDCFVNGCDGSVLLDATPTIDSEKNAFPNLNSARGFEVIDEIKKEVDQACGGPVVSCADILAVAARDSVVAVSDIVSLGGPTWKVNLGRRDSTNASREDANTNLPAPFFDLPQLIDSFKKQGLDENDLVLLSAAHTIGFASCATFRNRIYNDSNINPFFAAQLQKYGHVWFTICQTELTFAKSYFDLRLHNCVCPRSGGDNNLAALDSTPKNFDLSYFWNLVQKKGLLHSDQALFNGGSTDFLVAQYTVNPLAFYKGFASSMIKMGNIKPLTGNQGQIRVNCRIVN 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1121 355 FunFam Peroxidase 174 334 - -
Lele44g1121 355 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Lele44g1121 355 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Lele44g1121 355 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 PRINTS Plant peroxidase signature 289 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 PRINTS Plant peroxidase signature 273 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 PRINTS Plant peroxidase signature 329 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 PRINTS Haem peroxidase superfamily signature 275 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 Gene3D Peroxidase, domain 2 174 334 - -
Lele44g1121 355 SUPERFAMILY Heme-dependent peroxidases 30 355 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 Gene3D - 33 355 - -
Lele44g1121 355 ProSiteProfiles Plant heme peroxidase family profile. 29 355 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 Pfam Peroxidase 46 317 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 PANTHER PEROXIDASE 72-RELATED 28 353 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele44g1121 355 CDD secretory_peroxidase 30 354 IPR033905 GO:0004601|GO:0042744
Lele44g1121 355 FunFam Peroxidase 33 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1121 Lele-ChrLele44 19836161 19838908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1121 30 355 Peroxidase AT5G05340 53.495 2.72e-112 328