Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1110 ATGGGGAATTATAGGTTTAGATTATCAGATATGATCCCTAATGCTTGGTTTTACAAGCTCAGGGATATGGGGAAGAGGAAGAACCAGACATCATTGGACAAGAAGAAGAAGGAATCTTTACCCTCATCGACTTCGACAGCCTCAAAGACGTCAAAACCAAAGCAACCCCACCAGAGCATTCCCAGAAAGTCTTACTACTTTACGAGGGAACTTAATTATCATCAAACCGATAGAATCTACAACACTTCACCACCTCCTTCCTCTAAACCCAAAGTTTCTGTTTCAGACACCAATTTCCCAGAAACACCCAGAAAATCCTTGTCCAAACAGCAGATGAGGCCTAAGAGAAGAACCACAAGAACTTCTCCGAAGCTCGTCTCTTCCTCTGTTTCTTCTGGCTGTCACTGCCGAACCACTCTCGAATCCGTTTGGACCAAGTCGGATTCCCCACCTGACAACTCATCGTCTCCGTTTGACAGCTCTGCTGAATCAGAATTCCCAGAGCCAGAGTTCAGAACAGACCGTGTCCTTCCCACTGAGTCGTCATTTGATGATCATTGCAACAACAGCAAGCTAGAGTTTCATGAAAACGACATCGTAATCGACGTGGACAAGAATTCTATCGCAAGAAAAGATGATAAGCTTGATGGCTTGGATTCATTCTCCGAGATGGAGCTACCTCCGATCATAACCAAGCCAACCAAATCGAAGAAAGAAACCCAAGTAACCAAACCCAGAAACAGAGGACGAACATTCGAAGAACCTCGAGAACAGGGGAATCTCAAAGTCAAGATTTTGAAGGAAGATACTACTCTGAATGGAGAACAGAAGACGACACAGGTTCGGAGATTCTCCCTCAGCTCGCCGGGAGTGAAGATTCGGGTGAATTCCCCGAGAATAAGTGGCCGGAAGAGTCAGGGGTATAATGGCCGGAAAAGTGTGCCTTCGTCGTCGACGACGAGGAACTCCCGGAGAAGCCTCTCCCATAGCTTTGCGGTGGTGAAATCGTCGTTCAACCCACAGAAAGACTTCAGAGAGTCAATGGTGGAGATGATTGTGGAGAACAATATCAGAGCATCAAAAGAATTAGAAGATCTTCTTGCTTGCTATCTCTCTCTAAATTCAGATGAGTATCACGACCTCATCGTCAAAGTGTTCAAGCAGATATGGTTTGATTTGACTGACACCCATTAG 1194 0.4548 MGNYRFRLSDMIPNAWFYKLRDMGKRKNQTSLDKKKKESLPSSTSTASKTSKPKQPHQSIPRKSYYFTRELNYHQTDRIYNTSPPPSSKPKVSVSDTNFPETPRKSLSKQQMRPKRRTTRTSPKLVSSSVSSGCHCRTTLESVWTKSDSPPDNSSSPFDSSAESEFPEPEFRTDRVLPTESSFDDHCNNSKLEFHENDIVIDVDKNSIARKDDKLDGLDSFSEMELPPIITKPTKSKKETQVTKPRNRGRTFEEPREQGNLKVKILKEDTTLNGEQKTTQVRRFSLSSPGVKIRVNSPRISGRKSQGYNGRKSVPSSSTTRNSRRSLSHSFAVVKSSFNPQKDFRESMVEMIVENNIRASKELEDLLACYLSLNSDEYHDLIVKVFKQIWFDLTDTH 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1110 397 MobiDBLite consensus disorder prediction 23 132 - -
Lele44g1110 397 Pfam DNA-binding domain 1 45 IPR025830 GO:0003677
Lele44g1110 397 MobiDBLite consensus disorder prediction 144 162 - -
Lele44g1110 397 MobiDBLite consensus disorder prediction 144 172 - -
Lele44g1110 397 MobiDBLite consensus disorder prediction 237 256 - -
Lele44g1110 397 ProSiteProfiles OVATE domain profile. 333 392 IPR006458 -
Lele44g1110 397 MobiDBLite consensus disorder prediction 41 62 - -
Lele44g1110 397 MobiDBLite consensus disorder prediction 295 328 - -
Lele44g1110 397 Pfam Transcriptional repressor, ovate 337 393 IPR006458 -
Lele44g1110 397 MobiDBLite consensus disorder prediction 69 107 - -
Lele44g1110 397 MobiDBLite consensus disorder prediction 23 40 - -
Lele44g1110 397 MobiDBLite consensus disorder prediction 233 256 - -
Lele44g1110 397 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 68 394 IPR038933 GO:0045892
Lele44g1110 397 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 331 394 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1110 Lele-ChrLele44 19745687 19746880 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele44g1110 Ovate 2.5e-24 No_clan