LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele44g1108	ATGAGATTAGGAGGCATGGGGGTGGCTCAGATTCATTACGTTGAAACAGACCCATCTGGACGATATGGACGATTCAGGGATGTTTTGGGGAAAGGGGCGATGAAGATTGTGTACGAAGCATTTGATGAAGTGTTAGGAATTGAAGTGGCATGGAACCAAGTGAAGCTTGGAGACGTGTTTCATTCCCCAGATGAACTTCAACGACTTTATTCAGAGGTTCATCTTCTCAAGAACCTTGATCATCCCTCTATTATGACCTTCCATGCTTCATGGATCGATGTCCACCACAGAACCTTCAACTTCATCACCGAACTCTTCACCTCCGGCACCCTCCGAGAGTATAGGAAGAAGTACCGTAGAGTAGATATTCGAGCAGTGAAGAACTGGGCTCGTCAAGTTCTTAGTGGTTTGGAGTATTTGCACTGCCATGATCCTCCTGTAATTCATAGAGATCTCAAGTGTGATAATATCTTTGTCAATGGCCATCTGGGGCAGGTCAAGATCGGCGATTTAGGCCTCGCCGCCATCCTCCGCGGCTCTCAACGTACACCTGAATTCATGGCTCCAGAACTGTATGAAGAGGAATACAATGAACTTGTTGATATATACTCCTTTGGGATGTGTATGATTGAGATGCTTACCTCTGAGTTTCCATACAGCGAGTGCTCCAACCCAGCACAAATTTACAAGAAAGTCACTTCAGGGAAGCTACCTGATGCATTTTACAGAATCCAAGATTTGGAAGCCCAGAGATTCGTTGGGAAATGTTTGGCAAATGTATCGAAGAGATTGCCGGCAAAGGAACTCTTGTTGGATCCCTTTTTAGCGAAGGTCCAACTCGAATCACCACCGCCACCACCGTGCCTGCTATCACCAAAGATCCCAGCTCATTCCAAGTCCAATTCCAATTCAGTAGTTGCCAGCATGGTGTATTCTTCCATGGCTGATCATCAAACAAAGAGCACAAACATGACAATAACAGGGACAATGAATGAGGAAGATGACACAGTTTTCCTTAAAGTACAAATATCCGACAAAAATGGGCATGTCAGGAACATATACTTCCCCTTTGACACCATAAATGACACTGCAATGGACGTGGCGATTGAGATGGTTAGGGAATTGGAAATAAACGATTTGGAGCCATTGGAGATAGCTCAAATGATAGAGGAAGAGATATTAGCTCTGGTTCCAACTTGGAAGGATTGGGCCACCACTTCTCAGTGTCCACGTCAGCACAGCTTTAGATATGAAGAAGAAGAAGATGATGATGATGATGATGATATCAGCAACCACCATCCCTTTTTCTCATCTTCTACTTCACGATCTTCCTCTCATGGTTCTCACCCAATGCTCAGCTTCTCTAGCAAAACCCTCTTTGGTGGGAACAATAACCATTTCTCACTTCCTCAGGATTGGCTTCAAGATAATGATGGCTTTCTCGATGATGCAAGCTCGGAAAGCTCTATGAATTCCTTAAAGTATGCTCACATGAATCACTGCGACGCGGGCATCGAAGATAATGAGCATGATGCAAATTACAAGTGCTCAAGATTCTGTCCTGCACAAGAGATGGAAGCCAATTACAGTAATAAGCAGATGATCAGCTATCGAAGAACAACTGATTGCTACCGGAGATGCGGTGATCAACGGCCGGCGACGAGCATGACGAGGATGCGGTCATATGTGGATGTGAGGAGCCAGCAATTGCAGAGATCGTTACTGGAGGAGATCCATAAGAGAAGGATGTCGAAGACGGTAGGGGCCATTGAGAACATTGGCTTTCAGGATCCCGCAGCCACATGGAGGTCTGGTTCTTAA	1821	0.453	MRLGGMGVAQIHYVETDPSGRYGRFRDVLGKGAMKIVYEAFDEVLGIEVAWNQVKLGDVFHSPDELQRLYSEVHLLKNLDHPSIMTFHASWIDVHHRTFNFITELFTSGTLREYRKKYRRVDIRAVKNWARQVLSGLEYLHCHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQRTPEFMAPELYEEEYNELVDIYSFGMCMIEMLTSEFPYSECSNPAQIYKKVTSGKLPDAFYRIQDLEAQRFVGKCLANVSKRLPAKELLLDPFLAKVQLESPPPPPCLLSPKIPAHSKSNSNSVVASMVYSSMADHQTKSTNMTITGTMNEEDDTVFLKVQISDKNGHVRNIYFPFDTINDTAMDVAIEMVRELEINDLEPLEIAQMIEEEILALVPTWKDWATTSQCPRQHSFRYEEEEDDDDDDDISNHHPFFSSSTSRSSSHGSHPMLSFSSKTLFGGNNNHFSLPQDWLQDNDGFLDDASSESSMNSLKYAHMNHCDAGIEDNEHDANYKCSRFCPAQEMEANYSNKQMISYRRTTDCYRRCGDQRPATSMTRMRSYVDVRSQQLQRSLLEEIHKRRMSKTVGAIENIGFQDPAATWRSGS	606

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele44g1108	606	Gene3D	Phosphorylase Kinase; domain 1	9	104	-	-
	Lele44g1108	606	Gene3D	Transferase(Phosphotransferase) domain 1	106	280	-	-
	Lele44g1108	606	Pfam	Protein kinase domain	27	275	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele44g1108	606	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	147	159	IPR008271	GO:0004672\|GO:0006468
	Lele44g1108	606	ProSiteProfiles	Protein kinase domain profile.	23	275	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele44g1108	606	PANTHER	SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED	12	527	-	-
	Lele44g1108	606	MobiDBLite	consensus disorder prediction	433	449	-	-
	Lele44g1108	606	FunFam	probable serine/threonine-protein kinase WNK9	106	280	-	-
	Lele44g1108	606	SUPERFAMILY	Protein kinase-like (PK-like)	25	318	IPR011009	-
	Lele44g1108	606	MobiDBLite	consensus disorder prediction	417	449	-	-
	Lele44g1108	606	FunFam	Probable serine/threonine-protein kinase WNK1	8	104	-	-
	Lele44g1108	606	SMART	serkin_6	23	275	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele44g1108	Lele-ChrLele44	19726170	19730410	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele44g1108	11	425	MAP Kinase Kinase Kinase	AT3G51630	67.458	0.0	582

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	WNK_NRBP	Lele44g1108		Pkinase	5.3e-41	CL0016