Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1101 ATGAGGTGCTTCTCTGTCTTGAAAAGTAAGAAGAAAAAGTCTGAACAGATCATCCCTATAAAACATTTCAATCATAAAGAGCATGGAGTAGCAACCATAGTGCCTGAACCTCGAACTCATAATAGATCATTGCAGTCTGCACCTCCTAGTTTCAAGACAAGAGTGAAAACAATTCAACCTGTTAATAAAATCATGAAAAATAGAATACGAGCATTGTCTGCTCCTTCAACTCTTGATGCAGCAGAGCAAGATGCTTTGGCGTCAGTTGAGTATGAGGAACAAGAAGAGTCCAAACACCGAGCTGGATTAATGAAGGAGAAGCATGTATCTACTTCACAACCCTTACCTCTCCCATCTCCTCAGGTTGGTGGCGCATTAAAGGCTACCAGTAGCTTTAAGTTAGGGACAGCTAGTGGTCCTCTACATGCTTCTGGTCCTCTATATGCTTCTGGACCTTTGCCCCTGCCACCAACTGGTTCCCTACGAAACTTTCCATTTGAGGAAATTTCTGCTGCTTGCCACAATTTCTCTTCAGATCGATTCATGTCAGAAAGTCTTTCTTCTACCATGTATAATGCTTCCTTTGGTGATGATGCTTCTAGTTCTAGTTCAAAAACTTTTGAAGCCACTGTCACTCGTCTTCACCCTTCTACTCAGGCCTTGAAGGAGTTCATAAATGAGGTTAACATTATTGCATCTTTGCAACATCCAAACCTCTGCAAATTGTTAGGTTATCATGCTCGTGAGGGTTCAGAACAGAGAATGTTGGTTTATGAAAGGCTCTTTCATGGAAGCTTGGACCGCTTGTTGTATGGGAGATCTGATGGCCCACCACTTGATTGGAATACAAGAATGAAAATTGCTTTGTGTGCTGCCCAAGGTCTTACTTTATTGCATGAAGAAGGGCCCTTCCAGGCAATGTATAATGAGTTTTCTACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCTGAAGAAGAGATTCCAAGCAGTTCACCTGCGGTGGGAAACCTATCAGTGGAGACACTGGAAAGACGATTGCTAACTCCAAAGAGCAACGTTTGGAGCTTTGGCATTTTTCTTTTAGAACTACTGACTGGAAGAAAGAATCTGGATAGCCGTCACCCCAAGGAAGAGAGGAATTTAGTCAAGTGGAGTTGGCCATTTCTAGCCGACGATTGTCGACTGTCCTTGATCATGGATCCTCAACTGAAAGGTCGGTTTCCTTCCAAGGCAGCGAGGACAATAGCCGATATTGCACTAAGATGCCTTCAGAAGGAGCCATCAGAAAGACCCACCATGAGAGTTGTTGTTGAGCATCTGAAAATAGTACAGGATATTAAGAACTCTCTTCGGTTTCCTCTGCAAGAGCCTGCTGCAATTTCTGGAAAACAGATGTCAAGATCACCGAGTCTCAATGGCATCGTCTGTCCCCAGCCTAGAACAATTTTATTTCCGTCACCACCACCACTGCCTTCAGGAACACAACCATCTGGTTCACCTCCAAGATGGTCTGGTGGGCCCAACTTGCTTCCCTTGCGAGGGTGTTCCTCCATGCTTTCTTTGGATGAGCTTGATCGGCAGTTAAGCCAGAAGTCGTCTTCCTCGGCGTCTAGGAGGGTCAGTGTTGTAGGATATTGA 1677 0.4419 MRCFSVLKSKKKKSEQIIPIKHFNHKEHGVATIVPEPRTHNRSLQSAPPSFKTRVKTIQPVNKIMKNRIRALSAPSTLDAAEQDALASVEYEEQEESKHRAGLMKEKHVSTSQPLPLPSPQVGGALKATSSFKLGTASGPLHASGPLYASGPLPLPPTGSLRNFPFEEISAACHNFSSDRFMSESLSSTMYNASFGDDASSSSSKTFEATVTRLHPSTQALKEFINEVNIIASLQHPNLCKLLGYHAREGSEQRMLVYERLFHGSLDRLLYGRSDGPPLDWNTRMKIALCAAQGLTLLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEIPSSSPAVGNLSVETLERRLLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSWPFLADDCRLSLIMDPQLKGRFPSKAARTIADIALRCLQKEPSERPTMRVVVEHLKIVQDIKNSLRFPLQEPAAISGKQMSRSPSLNGIVCPQPRTILFPSPPPLPSGTQPSGSPPRWSGGPNLLPLRGCSSMLSLDELDRQLSQKSSSSASRRVSVVGY 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1101 558 Gene3D Phosphorylase Kinase; domain 1 157 259 - -
Lele44g1101 558 PANTHER OS01G0588500 PROTEIN-RELATED 101 457 - -
Lele44g1101 558 MobiDBLite consensus disorder prediction 539 558 - -
Lele44g1101 558 MobiDBLite consensus disorder prediction 495 509 - -
Lele44g1101 558 Pfam Protein tyrosine and serine/threonine kinase 205 453 IPR001245 GO:0004672|GO:0006468
Lele44g1101 558 ProSiteProfiles Protein kinase domain profile. 176 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1101 558 MobiDBLite consensus disorder prediction 91 106 - -
Lele44g1101 558 MobiDBLite consensus disorder prediction 495 521 - -
Lele44g1101 558 MobiDBLite consensus disorder prediction 90 119 - -
Lele44g1101 558 Gene3D Transferase(Phosphotransferase) domain 1 262 464 - -
Lele44g1101 558 SUPERFAMILY Protein kinase-like (PK-like) 158 466 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1101 Lele-ChrLele44 19651776 19654524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1101 155 459 Receptor kinase-like Gene Family AT4G02010 37.097 2.05e-53 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lele44g1101 PK_Tyr_Ser-Thr 5.4e-23 CL0016