Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1100 ATGAGTGCTGCTAATGCCAGCTTAAGGTTATTGTTTGGCTGCTCAGCTTTTTTATCGGGTTTTCAACTGTTTTTTTTTTTACTGGATGCAATGGAAGCTAAAGAATTGACTTTGAAAATGGCGTCACGAACTTGCATGAATGCGGCTTGTGCCACCTCGACATCGGTTCAGTGGCGGAAAGGATGGGCCCTGAGATCCGGTGAATTCGCCGATCTCTGTGATAAGTGCGGCTCTGCTTATGAGCAATCCACATTTTGCTATGTGTTCCACTCAAGAGATTCTGGTTGGAGGGAGTGCGTTTCATGTGGCAAGCGTCTTCATTGTGGATGTGTTGCTTCTCGAAATTTGCTTGAGCTACTAGATATTGGTGGTGTAAGCTGCATAAATTGTGCAAGAGATTCAGGACAACCTAGTTCAACTAGCGAAAAGCCTGATGGATCTGGTACATCAAAGGCTGAAATTGGGAGTGAACTACAATGCTCATTGGTTTCTAACCAATTCAAAGGAAGCAATGTTGAGAAAGTGAGAGGGGTGCGAGTTGGGGATTATGCAGAGAATGATGGGCTTAGGAGTTGGCTCCAGCCTCATAATGGTCCTACAAATGTACCTTCTATGCGATTAAAACAAGAAGTTATGCCTTTTATTGGGGAACTTGGAAGCACTTCAATATCACAATTCCATCCAGAGTCTAATGGATCATCTAAGGCTGTCAAGGTTGACAATTGCAAGACAGATGTAGAAATGAGAGATATGTATGAATCATTTGCTCAAACAAATTTGAGTATGACTCTTGGCGCACCTTTAGGGAATTCAAACTCCTTTAGTAATGATGTTTTTGATGAGAGGGAGCATGGTAAGACATCATCTTCAGCATTACCAGGGCCCAGATCTCGCCATCTCTTACCCAAGCCCCCTAGGTCAACCCTCACCACAGGTTTGGAGGCAAATGCAGGGATGGGGTCTCAAATTCGTGTTGCCAGGCCACCTGCTGAAGGACGGGGAAGGAATCAGTTACTTCCCCGTTATTGGCCTAGGATCACTGATCAAGAGTTGCAGCAAATCTCTGGAGATTCAAATTCAATCATTGTGCCGTTGTTTGAAAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTCTTCCAAAGGCTTGTGCTGAATTAGAACTGAATGAGGAAGTCATTTTGCAGACATATTTTCCTCCTATCTCTCAACCAGAGGGCCTTCCCTTACGAATTCAGGATGTGAAAGGAAAAGAATGGGTATTCCAGTTTAGATTCTGGCCAAACAATAACAGCAGAATGTATGTTCTAGAAGGGGTAACTCCCTGCATTCAGTCTATGCAGTTGCAAGCTGGGGATACCGTGACATTTAGTCGTATGGACCCTGAGGGAAAACTTATAATGGGGTTTCGGAAAGCTGCAAATTCTGCTTCTGTACAGGAATCTCATCCATCTAATATTCCCAACGGCAATCGTTCAAGTGAAACTTCCTATCCTGGTGTTTATGAGAATTTACCTGTATTAAGTGGCTACTCTGGCCTTCTACAGTCATTAAAAGGAAGTTCAGAAACCCACCTAAATGCGCTGTCTAAAAAATGGAATTCAGCTTGTGGAGACATGAATTGGCATAATATTGAGATGCCTGAAGGCAGGAAAAGAGAAGGATTGCTTCTGCCACCAGCGCTGGTTCCAGAGAAGAAAAAGACTCGTAATATTGGACCAAAAAGTAAGAGACTGCTTATTGACAGCCAGGATGCACTGGAGCTGAAACTAACCTGGGAAGAGGCTCAGGATTTGCTCCGTCCACCACCAGCAGTTAAGCCAAGCATTGTCATGATTGAAGATCATGTATTTGAAGAATATGAAGAGCCTCCTGTCTTCGGGAAGAGAAGTATATTTGTAGCCCGGTCGACTGGGATGCATGAACAATGGACTCAATGTGATAGTTGCTCAAAATGGCGAAAGTTGCCCGTGGACGTACTTGTTCCCCCTAAGTGGACATGCGGGGACAATTCATGGGATCAGAGCAGGTGTTCATGTTCTGACCCGAATGAGCTCACACCAAAGGATCTAGATAATCTTCTGAGATTAAATAAGGAATTCAAGAAACAAAGAATGGCGGCTAGCCACAGGCTGTCCCTGGAGCAGCATGAATCTTCTGGACTGGATGCTTTGGCTAATGCTGCAATACTTGGAGACGATCCCGGTGACTCTAGTAGGACAACGGTTGCTACCACGACAAAACACCCTCGGCATAGACCTGGTTGCTCCTGCATTGTCTGCATCCAGCCACCTAGTGGAAAGGGAAAACACAAACCTACGTGCACCTGCAATGTATGCATGACAGTTAAACGTCGGTTCAAGACCCTGATGATGCGAAAGAAGAAACGTCAATCTGAACGTGAAGCAGAGATTGCTCAGAGAAATCGGCAATCACGTGGGCCAAGGGATGAATCAGAAGTAGAAAGCACTTCTAGAAATTTAACCCCAGCTGATGGTTCTGAGACTGAAGCAAGGGTACCAAATGAGTTGGACTCAAAAAGTCAAACCGATGCGGCTGAAACTAGCAAGGGACAGTTAGACCTGAATTGTGATCCCGATCGAAATGACACGCAGGGTGGTTCAAACAGTGTCAGCATGATGAGTCTACTTCAAGAAGCAAGTCTCCCTTTGGAGACATATCTGAAGCAAAATGGTCTTACTAGCTTGGTATCAGAGCAACAAGCAGCAAATTCAGCTTCCAATGTGCAGGCGCAAACTGTGAACGAGAGCGAGGTAAGACACGGCGAGGATTGTTGTGCTGCTTCTGATGTTAAGGAGCAAGAAAGCAGTCATGAAGAGAACAGTGGTCAAGACAAAAGCGAAAACAATCCCCCTTCTTGA 2892 0.4499 MSAANASLRLLFGCSAFLSGFQLFFFLLDAMEAKELTLKMASRTCMNAACATSTSVQWRKGWALRSGEFADLCDKCGSAYEQSTFCYVFHSRDSGWRECVSCGKRLHCGCVASRNLLELLDIGGVSCINCARDSGQPSSTSEKPDGSGTSKAEIGSELQCSLVSNQFKGSNVEKVRGVRVGDYAENDGLRSWLQPHNGPTNVPSMRLKQEVMPFIGELGSTSISQFHPESNGSSKAVKVDNCKTDVEMRDMYESFAQTNLSMTLGAPLGNSNSFSNDVFDEREHGKTSSSALPGPRSRHLLPKPPRSTLTTGLEANAGMGSQIRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSIIVPLFEKMLSASDAGRIGRLVLPKACAELELNEEVILQTYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKAANSASVQESHPSNIPNGNRSSETSYPGVYENLPVLSGYSGLLQSLKGSSETHLNALSKKWNSACGDMNWHNIEMPEGRKREGLLLPPALVPEKKKTRNIGPKSKRLLIDSQDALELKLTWEEAQDLLRPPPAVKPSIVMIEDHVFEEYEEPPVFGKRSIFVARSTGMHEQWTQCDSCSKWRKLPVDVLVPPKWTCGDNSWDQSRCSCSDPNELTPKDLDNLLRLNKEFKKQRMAASHRLSLEQHESSGLDALANAAILGDDPGDSSRTTVATTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQRNRQSRGPRDESEVESTSRNLTPADGSETEARVPNELDSKSQTDAAETSKGQLDLNCDPDRNDTQGGSNSVSMMSLLQEASLPLETYLKQNGLTSLVSEQQAANSASNVQAQTVNESEVRHGEDCCAASDVKEQESSHEENSGQDKSENNPPS 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1100 963 MobiDBLite consensus disorder prediction 275 307 - -
Lele44g1100 963 MobiDBLite consensus disorder prediction 133 152 - -
Lele44g1100 963 FunFam B3 domain-containing transcription repressor VAL1 344 481 - -
Lele44g1100 963 SUPERFAMILY DNA-binding pseudobarrel domain 364 476 IPR015300 -
Lele44g1100 963 MobiDBLite consensus disorder prediction 732 756 - -
Lele44g1100 963 Pfam CW-type Zinc Finger 646 688 IPR011124 GO:0008270
Lele44g1100 963 Gene3D - 644 700 - -
Lele44g1100 963 Gene3D - 344 481 IPR015300 -
Lele44g1100 963 MobiDBLite consensus disorder prediction 917 963 - -
Lele44g1100 963 ProSiteProfiles B3 DNA-binding domain profile. 366 477 IPR003340 GO:0003677
Lele44g1100 963 MobiDBLite consensus disorder prediction 927 955 - -
Lele44g1100 963 SMART B3_2 366 476 IPR003340 GO:0003677
Lele44g1100 963 MobiDBLite consensus disorder prediction 794 880 - -
Lele44g1100 963 CDD B3_DNA 364 475 IPR003340 GO:0003677
Lele44g1100 963 ProSiteProfiles Zinc finger CW-type profile. 641 691 IPR011124 GO:0008270
Lele44g1100 963 MobiDBLite consensus disorder prediction 798 826 - -
Lele44g1100 963 Pfam B3 DNA binding domain 366 475 IPR003340 GO:0003677
Lele44g1100 963 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 42 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1100 Lele-ChrLele44 19642975 19650404 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1100 43 917 B3 DNA Binding Superfamily AT4G32010 49.829 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele44g1100 B3 5.9e-13 CL0405