LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele44g1088	ATGAAGGAACTAGAGAGAGGGCGTGAATTTGCGAACCAGCTTCGAGAATTGATGTTTAGGTCTGGGGATGAAGAAGATGATATTAAGGTTAAGTCCTTAAAGCCGTCTGCTGAGGATCTTGCGGCCAAAGTGCTTGGTTCTTTCACCAACGCACTCTCTCTCTTCAACAACAATCACCATCATGTTCCTGAAGATTCCTCTACTTCTTCGTTCTCTCACTTGCCTGCTTACTCTGATGATTCTCACGAGAGCCCTAGGATCTCTAAGACAAGAAGCCCCACTACCACCATTAAAGATCGAAGAACATGCTCTCCCAAGAAAAGATGCACTCATAAGTATGAGCAAGGTTGCAAAGCAAAAAAACAAGTTCAACAAATCCAAGACGATCCTCCTCTCTATAGAACCACTTATTTTGGCCACCACACTTGCACCAACCTCCTTAATCCTCAGATCCTTCTTGATGATTCTCATGATGACCTTAATTCAACCTCTGCTTGTATGCTCAGATTCGACAATAATCGTGGTATTACCACCACCTTTGACCAAAAAGTCAAAACACACCAACAAAACCATCTCTTTCTCTCGCCCAGCTGCTCTTTATTTCCATCATCTGCTGGTTCTGTCAAACACGAGGATCATCACTGTCACAACATCGAGCAAGAGAAGAACATTAATTACATTAACGATTATATTGATGTTGTTGTTCCTCCTTCATGTTCATCCAATGATTGCCTTGTGTCTCCTGATGAAGAAGAAGCAGTTGATCTTCCTTTTGGATATGGAGATGATCAAGTAGGGGACGTGTTTAATTCTCTTGTGCTTGAAGATCCCGTATTTGAGATGATTTTTGATCACTAG	858	0.4196	MKELERGREFANQLRELMFRSGDEEDDIKVKSLKPSAEDLAAKVLGSFTNALSLFNNNHHHVPEDSSTSSFSHLPAYSDDSHESPRISKTRSPTTTIKDRRTCSPKKRCTHKYEQGCKAKKQVQQIQDDPPLYRTTYFGHHTCTNLLNPQILLDDSHDDLNSTSACMLRFDNNRGITTTFDQKVKTHQQNHLFLSPSCSLFPSSAGSVKHEDHHCHNIEQEKNINYINDYIDVVVPPSCSSNDCLVSPDEEEAVDLPFGYGDDQVGDVFNSLVLEDPVFEMIFDH	285

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele44g1088	285	MobiDBLite	consensus disorder prediction	79	102	-	-
	Lele44g1088	285	MobiDBLite	consensus disorder prediction	62	77	-	-
	Lele44g1088	285	MobiDBLite	consensus disorder prediction	62	102	-	-
	Lele44g1088	285	ProSiteProfiles	WRKY domain profile.	108	141	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele44g1088	285	Gene3D	WRKY domain	82	145	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele44g1088	285	SMART	WRKY_cls	104	145	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele44g1088	285	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	108	162	IPR044810	GO:0003700
	Lele44g1088	285	SUPERFAMILY	WRKY DNA-binding domain	107	144	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele44g1088	285	Pfam	WRKY DNA -binding domain	108	143	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele44g1088	Lele-ChrLele44	19551011	19552316	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele44g1088	1	160	WRKY Transcription Factor Family	AT3G56400	28.788	1.44e-14	70.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele44g1088		WRKY	8.2e-09	CL0274