Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1086 ATGATTCCTGATAAACCACTGCTTCCAGAATTAGATTGCTCTCTGGGGATTCATCGCCGTGCACGTAAATCAGGATCTTTCAGTCGGTATGTCTCCTTCCCATCTACCATTTTTGATGAAACTCAAAGTGGTAGTTTTGATGTGAAGGACGTAGACGTTGTATCTGCTGGAGACTCTAGTTTTCATGGTGCACTTGAACATTGCACTTCTTTGACAGAGAGGGACTCTCAATCAGCTGAATCCGAGTTTTGCCAGCAGCTACCTTTGGAATGCTCCACTCGAGAGAGGAGGTGCCTGACATCGTGGGGTGCAATGGAACAGCATGATATGAATAGCAATACTGTGCCATTTGAAATATCAGGTGCTCCATCTCGAGTGCAGGAAAAGAATAAATCACAGAGAATTCGTCACAGAAGTGTGCAATTTGAGGATAACCTCTTGCATGATGACAATTCGAGGTCAATATACATCAATGATCCCAAGAAGACAAATGACAAATATGAGTTCACGGGAAATGAGATTCGAACTAGTAGATACACAATTATCACCTTCCTGCCTAAAAATCTTTTCATTCAGTTTCATCGTGTTGCTTACTTGTATTTCCTTGCTATTGCTGCTCTAAATCAGCTCCCTCCCCTGGCTGTATTTGGTAGGACAGTGTCTCTTTTTCCCCTCTTGTTTGTTCTTTGTGTCACAGCTATTAAGGATGGTTATGAGGATTGGCGGAGGCACAGGTCGGACCGCAATGAGAACAACCGAGAGTCCCTGGTGCTTCAATCTGGTGATTTCCGACCAAAAAAATGGAAGAATATTGAAGTTGGCGAGGTTGTTAAAATCTTAGCTGATGAGACTATACCCGTTGACATGGTCTTGTTGGGGACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAACTTAGATGGTGAATCAAATTTAAAGACAAGGTATGCTCGGCAGGAAATGGCTTCAGCAGTATCGCCAGATTGTTGTACTGTTTCTGGGATCATTAGATGTGAGCAGCCAAACAGGAATATTTATGAATTCACAGCCAACATGGAGTGCAATGGGCATAGGTTTTCCCTTAGTCAATCAAATATCGTTCTGCGTGGTTGCCAACTGAAGAACACGGATTGGATAATTGGTGTTGTGGTTTATGCAGGGCAGGAAACAAAGGCTATGTTGAACAGTGCAGCTTCCCCTTCGAAGAGAAGCAGACTGGAGGGTTATATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTCTTTATCATGTGTTTGGTTGTGGCCGTTGGGATGGGTCTTTGGCTGATGCGTCATAAGGACCAGCTTGACACCTTGCCATACTACAGAAAAAGATTCTTCACAAGGGGTCCTGATAATGGAAAAAGATACAGATATTATGGGATACCAATGGAAATCTTTTTCTCATTTTTGAGCTCTATTATAGTTTTCCAGATAATGATACCCATATCTCTTTACATAACTATGGAGCTGGTTCGTTTGGGCCAGTCATATTTCATGATTGAGGATGGGGATATGTATGATGTCAACTCTGGATCAAGGTTTCAGTGTAGGTCATTAAATATCAATGAAGATCTGGGCCAAATACGTTATGTTTTTTCAGACAAGACAGGAACACTTACAGAAAATAAGATGGAATTTCGAAGAGCTAGTATACATGGAAGCAATTATGGGAGTTCATTACTTGTGGGCGATAATACAATAGCAGCAGCATTTAGTGGCAGAGGGAGATGGAAGCTCAAATCTGAAATTGCTGTTGATTCAGAACTCATAACACTGTTGCATACAGACTCAGATAGAGAAGAAAGGATTGCTGCACATGAATTTTTCCTTACATTGGCGGCTTGCAATACTGTGATCCCTATCCTTAGTTGTGGAACAAGTGAGTCAAATGAGGGTGTAGAATGTATTGAATACCAGGGAGAATCTCCTGATGAGCAAGCATTAGTTGCTGCAGCCTCCGCTTATGGATACACACTTTTTGAGCGGACATCAGGACACATTGTTATTGATGTCAATGGTGAGAAACTCAGGTTGGATGTATTGGGTCTGCACGAGTTTGATAGTGTTCGGAAAAGAATGTCTGTTGTTATTCGATTTCCTGACTATACGGCAAAGGTGTTAGTTAAAGGAGCTGATACTTCAATGTTTAGCATCTTAGCTGATGAAGTTGACAGTGATGATAATATACGGCATGCAACTCTGGGCCATTTAAATGAATATTCTTTGCAAGGTTTACGCACTCTTGTAGTTGCTTCCAAGAATCTTTCAGATGCAGAACTTGAGCAGTGGCAGAGCATGTATGAAGAAGCAAGCACTTCATTAACTGATAGAGGTGCAAAACTACGCCAAACAGCAGCTCTAATAGAAAGGAACTTAAAGCTACTTGGAGCAACTGGGATTGAGGACAAACTGCAAGAGGGTGTACCGGAAGCTATTGAGTCCTTGCGGCAAGCTGGAATTAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACCGCAATTTCAATAGGTCTCTCCTGCAAACTTTTGACTTCAGATATGCAGATGATAATTATAAATGGGACATCAGAAAATGATTGCAGAAATCTTTTGGCTGATGCTAAAGTCAAATTTGGTATAAGATCTGTATGTAAAAGAAACCAGAATATGAGGTACAAAACCAATGACGGACGTGGTGATCTTGAGACTGCCCATAATACAAAGTCATTCAATATGCCTAAATGTGATCTAAGGGAAGAAGGATCTAATGCTCCACTGGCGCTTGTAATTGATGGAAACAGTTTGGTTTACATCTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCGACTTCTTGTAGAGTTGTGCTATGCTGTCGTGTTGCACCTCTGCAGAAAGCAGGAATTGTTGATTTGATAAAGAGCCGCACTGATGATATGACACTGGCTATTGGTGATGGGGCCAATGATGTGTCAATGATCCAAATGGCAGATGTCGGTGTTGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCTGATTTTGCTATGGGACAGTTTCGGTTCTTGAAAAGATTGCTTCTGGTGCATGGACACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTCTACAATTTCTACCGCAATGCTGTCTTTGTCTTGATGTTATTCTGGTATATATTATGCACTGCTTTTTCAACAACTTCTGCATTGACAGATTGGAGCAGTGTATTCTATTCTGTTATATACACATCAGTCCCTACTATTGTTGTTGGTATTCTGGACAAAGATTTGAGTCATAAGACACTCTTGCAGTATCCAAAACTGTATGGTGCAGTGACATGGTGGCCAGTGGTTGTGATGTTTGTGGGGGTGATGGTGAAGACCAGTGGCGGTGGCGGTGGTGATGGTGGTAGCTAG 3438 0.42 MIPDKPLLPELDCSLGIHRRARKSGSFSRYVSFPSTIFDETQSGSFDVKDVDVVSAGDSSFHGALEHCTSLTERDSQSAESEFCQQLPLECSTRERRCLTSWGAMEQHDMNSNTVPFEISGAPSRVQEKNKSQRIRHRSVQFEDNLLHDDNSRSIYINDPKKTNDKYEFTGNEIRTSRYTIITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRPKKWKNIEVGEVVKILADETIPVDMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQEMASAVSPDCCTVSGIIRCEQPNRNIYEFTANMECNGHRFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLEGYMNRETLWLSIFLFIMCLVVAVGMGLWLMRHKDQLDTLPYYRKRFFTRGPDNGKRYRYYGIPMEIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDGDMYDVNSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASIHGSNYGSSLLVGDNTIAAAFSGRGRWKLKSEIAVDSELITLLHTDSDREERIAAHEFFLTLAACNTVIPILSCGTSESNEGVECIEYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDYTAKVLVKGADTSMFSILADEVDSDDNIRHATLGHLNEYSLQGLRTLVVASKNLSDAELEQWQSMYEEASTSLTDRGAKLRQTAALIERNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTSDMQMIIINGTSENDCRNLLADAKVKFGIRSVCKRNQNMRYKTNDGRGDLETAHNTKSFNMPKCDLREEGSNAPLALVIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIVVGILDKDLSHKTLLQYPKLYGAVTWWPVVVMFVGVMVKTSGGGGGDGGS 1145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1086 1145 Pfam Cation transport ATPase (P-type) 651 726 - -
Lele44g1086 1145 CDD P-type_ATPase_APLT_Dnf-like 171 1116 - -
Lele44g1086 1145 Gene3D - 228 398 - -
Lele44g1086 1145 Pfam Phospholipid-translocating ATPase N-terminal 155 220 IPR032631 -
Lele44g1086 1145 Pfam E1-E2 ATPase 253 500 - -
Lele44g1086 1145 SUPERFAMILY Calcium ATPase, transmembrane domain M 169 1125 IPR023298 -
Lele44g1086 1145 SFLD p-type atpase 526 1039 IPR044492 -
Lele44g1086 1145 SUPERFAMILY HAD-like 537 1034 IPR036412 -
Lele44g1086 1145 FunFam Phospholipid-transporting ATPase 648 792 - -
Lele44g1086 1145 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 132 1118 - -
Lele44g1086 1145 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 548 818 IPR023299 GO:0000166
Lele44g1086 1145 ProSitePatterns E1-E2 ATPases phosphorylation site. 544 550 IPR018303 -
Lele44g1086 1145 PRINTS P-type cation-transporting ATPase superfamily signature 542 556 - -
Lele44g1086 1145 PRINTS P-type cation-transporting ATPase superfamily signature 988 1007 - -
Lele44g1086 1145 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 958 1074 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele44g1086 1145 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 797 853 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele44g1086 1145 FunFam Phospholipid-transporting ATPase 801 1028 - -
Lele44g1086 1145 Gene3D - 643 785 IPR023299 GO:0000166
Lele44g1086 1145 SUPERFAMILY Calcium ATPase, transduction domain A 252 394 IPR008250 -
Lele44g1086 1145 Gene3D - 802 1028 IPR023214 -
Lele44g1086 1145 SFLD C1.7: P-type atpase like 526 1039 - -
Lele44g1086 1145 Pfam Phospholipid-translocating P-type ATPase C-terminal 1016 1117 IPR032630 -
Lele44g1086 1145 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 169 1118 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1086 Lele-ChrLele44 19528082 19535265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1086 132 1117 Primary Pumps ATPases AT5G04930 58.853 0.0 1162