Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1084 ATGCAGATTGCTAATTGGATCTTCATGAGTTCAACAACTACCGGACCATACTCCGTTTCCTGTGCATCGGGAAACAAGAACAGCCTCTTCTGCTGGATTTTGCTTTCCTTACTGCCAAAGTATTTGGGAACTCCATTTGTACGCTTCAACTTTCTTCTCATTCGGGCAATTGACAGAAGTCCATCGGCATTTTCTGATTTGCCTAAGACTGGCAATTGCAAACCATTCCAGACCCAAATGCTCTTTCCTGCAAAGCTCACTGACAGTGTAATTACGGACCAAGTTGAGCTTGATTTCTCTGATGTCTTTGGTCCAGTTACAGTGCCTTCTTTGGATGTGAATGACGCTGATTCTGCTATTGAGCACGTGGAAGAATCAAGTGAACTCGTTTATGATGGTCCAGCTGTCATTTATACCCGCTCACATTCATTGGTTGGCCCTTCTACTTGTGTTAGCCAATCACTTAAGCTTGGCAAACTCACTTTACATGAAACTGAGGATTCATTGGAAGCAATGGAACATGTTACTGGGGAGACTCTTGAAGAAGTTGATGAATCTAATGGCAACAATGTCATCATTGATGAGAGTCTTGAATGTGATAACGGGCATCTCATGAAGATCCAGAAAGTGAGCATTGAAGATTTTGAGATTTTGAAGGTTGTAGGACAGGGAGCATTTGCAAAAGTATATCAAGTGAGGAAAAAGGGTACTTCTGAAATATATGCAATGAAGGTAATGAGAAAGGACAAAATTATGGAAAAGAACCATGCTGAATACATGAAAGCTGAGAGGGATATTTTAACCAAAATAGAGCACCCCTTTGTTGTTCAACTTAGATACTCTTTCCAGACAAAATACAGATTGTATCTTGTGCTGGATTTTGTAAATGGGGGCCATCTTTTCTTTCAGCTTTATCATCATGGCCTTTTCAGAGAGGATCTAGCACGCATATATGCTGCTGAGATTGTTTCTGCAGTTTCCCATCTCCATGCAAACGGAATAATGCACAGGGATCTAAAACCTGAAAATATCCTGCTGGATGCTGATGGCCATGTTATGCTGACGGATTTTGGCCTGGCCAAGCAATTTGAAAGCGATGCAAGATCTAATTCCATGTGTGGAACAATAGAGTACATGGCACCTGAAATTATTCTTGGCAAGGGCCATGATAAGGCTGCTGATTGGTGGAGTGTTGGAATCCTACTGTATGAGATGCTTACGGGAAAGCCTCCTTTCTGTGGTGGAAACCGTGTCAAGATTCAGCAGAAAATTATGAAAGACAAGATCAAGCTGCCAGCATTTTTGTCTAGTGAAGCACATTCACTGCTGAAAATGCTCCTGCAGAAGGATGTGACTAAGCGATTAGGCAGTGGAACAAAGGGCGGCTTAGAAATAAAAAATCACAAGTGGTTTAAACCAATCAATTGGAGGAAGTTGGATGCACGTGAGGTCCAACCAAGCTTTCGCCCTGAAGTTGCCGGAAAGCATTGTGTTGCCAACTTTGAGAAACGCTGGACTGATATGCCCATCTTGGATTCGCCGGCTGCTAGTCCAAATGGCGGCAATCCTTTCAAAGACTTCAGTTATGTGAGATCTGCAGCTTCTTTCCTTCAAAGGAATAGCCCTGCTTACTAG 1635 0.4257 MQIANWIFMSSTTTGPYSVSCASGNKNSLFCWILLSLLPKYLGTPFVRFNFLLIRAIDRSPSAFSDLPKTGNCKPFQTQMLFPAKLTDSVITDQVELDFSDVFGPVTVPSLDVNDADSAIEHVEESSELVYDGPAVIYTRSHSLVGPSTCVSQSLKLGKLTLHETEDSLEAMEHVTGETLEEVDESNGNNVIIDESLECDNGHLMKIQKVSIEDFEILKVVGQGAFAKVYQVRKKGTSEIYAMKVMRKDKIMEKNHAEYMKAERDILTKIEHPFVVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHHGLFREDLARIYAAEIVSAVSHLHANGIMHRDLKPENILLDADGHVMLTDFGLAKQFESDARSNSMCGTIEYMAPEIILGKGHDKAADWWSVGILLYEMLTGKPPFCGGNRVKIQQKIMKDKIKLPAFLSSEAHSLLKMLLQKDVTKRLGSGTKGGLEIKNHKWFKPINWRKLDAREVQPSFRPEVAGKHCVANFEKRWTDMPILDSPAASPNGGNPFKDFSYVRSAASFLQRNSPAY 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1084 544 Pfam Protein kinase C terminal domain 493 529 IPR017892 GO:0004674|GO:0005524|GO:0006468
Lele44g1084 544 Gene3D Transferase(Phosphotransferase) domain 1 295 490 - -
Lele44g1084 544 ProSiteProfiles Protein kinase domain profile. 215 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1084 544 CDD STKc_AGC 221 471 IPR045270 GO:0004674|GO:0005524
Lele44g1084 544 SMART pkinase_C_6 472 531 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele44g1084 544 PANTHER RIBOSOMAL PROTEIN S6 KINASE 174 533 - -
Lele44g1084 544 ProSiteProfiles AGC-kinase C-terminal domain profile. 472 539 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele44g1084 544 SUPERFAMILY Protein kinase-like (PK-like) 212 532 IPR011009 -
Lele44g1084 544 FunFam Non-specific serine/threonine protein kinase 212 317 - -
Lele44g1084 544 FunFam Non-specific serine/threonine protein kinase 295 490 - -
Lele44g1084 544 SMART serkin_6 215 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1084 544 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672|GO:0006468
Lele44g1084 544 Gene3D Phosphorylase Kinase; domain 1 212 512 - -
Lele44g1084 544 Pfam Protein kinase domain 215 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1084 544 ProSitePatterns Protein kinases ATP-binding region signature. 221 244 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1084 Lele-ChrLele44 19511139 19513907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1084 69 541 AGC Kinase Gene Family AT3G08720 68.487 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Lele44g1084 Pkinase 7.5e-75 CL0016