Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1076 ATGACTTCGAATCTCTCGGGAAGTCTAGCACCTGAGCTTGGTCTGCTATCTCGGCTTCAGATAATGAATTTCATGTGGAATGATCTAACAGGCACCATACCCAAGGAGATAGGAGATATCAAATCATTGAAACTCTTACTCCTGAATGGCAATAAGTTATCTGGTTCTTTGCCTGATGAACTTGGCAATCTCTCAAACTTGAATAGGCTCCAAGTTGACCTAAACCAATTGTCAGGTCCAATACCACAATCGTTTGCCAACTTGGCCAGTGTTAAACACCTCCACTTGAACAATAACTCATTTACTGGTCAAATTCCACGTGAACTTTCAAAGCTACCCAAACTATTGCATTTGCTTGTGGACAATAACAACTTTACTGGCCATCTTCCACCAGAATTTTCCATGTTACCATTGCGCATACTCCAAGTCGATAACAATAATTTCAGTGGAGCAGAAATCCCTTCTACCTATGCAAACTTTTCCAAGCTAGTAAAACTTGACTTATCAAATAACAAGATCAACGGATCTATTGCTGAAAGCTTCACATTACTTCCTTTACTTCAAAGTTTGTCACTAGCGAACAATTATTTTTCTGGATCCTTCCCTATTGGTATATTGCCGAACATGTCCTTCAGTAGGGATGCTAAGCTCACAATTGATCTCCGCAATAATTCATTGTCAGACATTTCAGGGAGTTCAAGTCTACCAGCAAATATCACCTTGAGGCTTGCTGGCAATCCTATCTGCAAGAATTCTAACGTTCAAGATATCATTCGATATTGTGACTCTGAAGGCGTTGAATCTGACAAACCTGTAAATTCAACATCTACCTGTGGCTTTCAAACTTGTCCAAGGGATGAGTCCTATGAATATGTCCCAGCTTCTCCTTTTCCCTGCTATTGTGCAGCACCTCTGAGAATTGGATATCGTCTGAAAAGCCCAAGTTTCTCTTACTTTACTCCTTATAGATCTTATTTCGAGTTATATCTGGCTCAGGATTTACATTTGGACCTATACCAAGTATGGATAGATTCAATTGCTTGGGAAGCAGGACCTCGTCTTAGGATGTATTTGAAACTTTATCCTAATTACAATGATTCCCACTCTCATGTGTTCAATATAAGCGAGGTCCGGCGTATTCAAGGCAAATTTGGATCATGGAGTTTTACTCCCACTGATTTTTTTGGACCATATGAACTCCTGAACTTCACTCTCCTTGGACCTTATGAACAATCTATTGTTTGTGCTACCGTGATCTCTGCAATAGTCACTCTCGTGATAGCCAAAAGACTTATCAAATACCCTCCCATGCTATCGAGGAATCCTATGTCCTCTAATATTTTCATCAAAATTGATGGAGTGAGAGCATTCACTCTCAAAGAACTGGCTCAGGCAACTAACAATTTCTGCAGTTCCACTATCGTTGGCCGAGGAGGTTACGGGAAGGTTTATAAAGGAATTCTGTCTGACGAAACAGTCGTGGCCGTAAAGCGAGCAGACGAGGGTTCTTTGCAAGGCCAAAGAGAATTTTTGACTGAGATTGAACTTCTATCAAGGTTACATCATCGAAATCTAGTCTCATTGGTCGGATACTGTTATGAAGGAGGAGAGCAGATTCTGGTTTACGAGTTCATGCTTAATGGCACCTTGCGGGAGTGGATTTTGGGTAAAAGGAAGGGAAACTTAAACTTTGGTAGGAGGTTGAGGATTGCAATGGGTGCCGCCAAAGGTATATTGTACCTTCATACCGAGGCTAACCCTCCTATATTCCACCGAGACATTAAGTCTAGCAACATACTTCTGGACCGCATTCTGGTTGCTAAGGTGGCTGACTTCGGACTCTCACGCCTTGCCCCGAATATGGATGCCGAAGGAAACATGCCTAAATATGTGTCAACAGAGTACGTGAGGGGAACACCGGGATACATTGATCCTGATTACTTTTTGAGTCTGAAGTTGACGGACAAAAGTGATGTTTATAGCTTGGGAATTGTGTTTCTGGAGCTTTTGACAAGCATGCATCCAATATTGCATGGGAGACACATCGTTCGTGAGGTTAACGAGGCTCGTCAGTGTGGGACGATATTTTCCATTATAGATAGCAAAATGGGTTCATATCCATCAGATTGTGTGGAGAAGTTTCTAAATCTTGGCCTCAGTTGTTGCCATGAGAATCCAGAGGAGAGGCCATGCATGACAGATGTGGTGAGGGAGCTGGAGATTATTCTCTCAATGTTGTCAGATTCCGAAACTGCTTTCCCAGACAGTTCATCTGATTTTTCTGTCAAAATGGCTTCAACATCGTCGTCGCCATCAGCATCCTACATGGTAAGAGATGGCCACCAACACATGTCCTCTCGTATGTTGTCAGGAAGCAACCTCGTCAGTGATGTCATTCCCACCATCGTTCCTCGTTAA 2418 0.4231 MTSNLSGSLAPELGLLSRLQIMNFMWNDLTGTIPKEIGDIKSLKLLLLNGNKLSGSLPDELGNLSNLNRLQVDLNQLSGPIPQSFANLASVKHLHLNNNSFTGQIPRELSKLPKLLHLLVDNNNFTGHLPPEFSMLPLRILQVDNNNFSGAEIPSTYANFSKLVKLDLSNNKINGSIAESFTLLPLLQSLSLANNYFSGSFPIGILPNMSFSRDAKLTIDLRNNSLSDISGSSSLPANITLRLAGNPICKNSNVQDIIRYCDSEGVESDKPVNSTSTCGFQTCPRDESYEYVPASPFPCYCAAPLRIGYRLKSPSFSYFTPYRSYFELYLAQDLHLDLYQVWIDSIAWEAGPRLRMYLKLYPNYNDSHSHVFNISEVRRIQGKFGSWSFTPTDFFGPYELLNFTLLGPYEQSIVCATVISAIVTLVIAKRLIKYPPMLSRNPMSSNIFIKIDGVRAFTLKELAQATNNFCSSTIVGRGGYGKVYKGILSDETVVAVKRADEGSLQGQREFLTEIELLSRLHHRNLVSLVGYCYEGGEQILVYEFMLNGTLREWILGKRKGNLNFGRRLRIAMGAAKGILYLHTEANPPIFHRDIKSSNILLDRILVAKVADFGLSRLAPNMDAEGNMPKYVSTEYVRGTPGYIDPDYFLSLKLTDKSDVYSLGIVFLELLTSMHPILHGRHIVREVNEARQCGTIFSIIDSKMGSYPSDCVEKFLNLGLSCCHENPEERPCMTDVVRELEIILSMLSDSETAFPDSSSDFSVKMASTSSSPSASYMVRDGHQHMSSRMLSGSNLVSDVIPTIVPR 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1076 805 Gene3D Ribonuclease Inhibitor 106 219 IPR032675 -
Lele44g1076 805 ProSitePatterns Protein kinases ATP-binding region signature. 475 497 IPR017441 GO:0005524
Lele44g1076 805 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 4 768 - -
Lele44g1076 805 Pfam Leucine rich repeat 138 196 IPR001611 GO:0005515
Lele44g1076 805 Pfam Leucine rich repeat 65 125 IPR001611 GO:0005515
Lele44g1076 805 ProSiteProfiles Leucine-rich repeat profile. 162 184 IPR001611 GO:0005515
Lele44g1076 805 ProSiteProfiles Protein kinase domain profile. 469 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1076 805 Gene3D Ribonuclease Inhibitor 1 105 IPR032675 -
Lele44g1076 805 SUPERFAMILY Protein kinase-like (PK-like) 454 772 IPR011009 -
Lele44g1076 805 Pfam Protein tyrosine and serine/threonine kinase 474 739 IPR001245 GO:0004672|GO:0006468
Lele44g1076 805 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 545 755 - -
Lele44g1076 805 CDD STKc_IRAK 475 742 - -
Lele44g1076 805 Gene3D Transferase(Phosphotransferase) domain 1 545 761 - -
Lele44g1076 805 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 58 150 - -
Lele44g1076 805 SMART serkin_6 469 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1076 805 Gene3D Phosphorylase Kinase; domain 1 440 544 - -
Lele44g1076 805 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Lele44g1076 805 FunFam Leucine-rich repeat protein kinase family protein 437 544 - -
Lele44g1076 805 SUPERFAMILY L domain-like 3 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1076 Lele-ChrLele44 19440139 19448013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1076 1 751 Receptor kinase-like Gene Family AT5G01950 55.043 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele44g1076 PK_Tyr_Ser-Thr 1.7e-43 CL0016