Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1073 ATGGCAGCCATGGCTCAGCTTCGTTTTTCTCCTCTCTCTGGTTCCTATCACACCGTTTCAGGGTCAGATGCTCGCGCATTCAACCCCCATTCTGTTATTCCGTTCCCATGCTCCTTCCCCCCTCGAAATCGATCTCTGCCTCTCATCAACCCAAAGGTTTACGAGCCCACTTTGCCGGAGAATCTGCAAATTTCATTTGCCGGCGGTGATGGTAGCGACAGGGTTGGGCGCGGAGGAGGTGACAACAGCAACGGCGGCAGCGGAGATTGGGGAAACCGCGGGAATTCCGATGATGATCCATCTTCATCATCGTCTAACGGACTCGGTATTCTGGGCATGTTTCTGGCGGGATGGAGATCCAGGGTTGCCGCGGATCCCCAATTCGCTTTCAAGGTTCTGATGGAAGAATTGGTGGGTGTGAGCGCTTGCATCGTTGGAGACATGGCTTCTCGTCCAAATTTCGGATTGAACGAGCTTGATTTCGTTTTCTCCACACTCGTTGTCGGATCAATCTTGAATTTCACCCTCATGTATCTATTAGCACCCACTGTGGCTTCTTCTTCATCCTCAACTCTACCTTCAGTCTTTGCAAGCTGCCCTACAAGCCATATGTTTGAATCAGGTGCTTATGGGATCCTCGATCGATTTGGAACGCTAGTTTACAAAGGAACCGTGTTTGCAGTAGTTGGATTTGCAGCTGGGCTTGTAGGAACTGCAATTTCAAATGGGTTAATCATGATCAGGAAGAAGATGGATCCAAACTTTAAGACACCAAACAAGCAACCTCCGACGTTGTTGAATGCTATGACATGGGCGGCTCACATGGGATTTGGCAGCAATCTGAGGTACCAAACACTGAATGGGATTGAATTTGTGTTGGAGAAAGGGCTTCCTCCATTGGCATTCAAAGCATCTGTGGTTGTTCTGAGATTGTTGAACAATGTTGTTGGAGGCATGACATTTGTGATGCTGGCGAGGTTCACTGGTTCACAGAGTGTATCAGAACAACAAAAGCCATTAGCAGTTGCAGCAGAGAAGGAGAGATTGGAGAGCAGAGGAGAGGATATGCAGAGCTCAAAGTGA 1083 0.4866 MAAMAQLRFSPLSGSYHTVSGSDARAFNPHSVIPFPCSFPPRNRSLPLINPKVYEPTLPENLQISFAGGDGSDRVGRGGGDNSNGGSGDWGNRGNSDDDPSSSSSNGLGILGMFLAGWRSRVAADPQFAFKVLMEELVGVSACIVGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTVASSSSSTLPSVFASCPTSHMFESGAYGILDRFGTLVYKGTVFAVVGFAAGLVGTAISNGLIMIRKKMDPNFKTPNKQPPTLLNAMTWAAHMGFGSNLRYQTLNGIEFVLEKGLPPLAFKASVVVLRLLNNVVGGMTFVMLARFTGSQSVSEQQKPLAVAAEKERLESRGEDMQSSK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1073 360 Pfam Protein RETICULATA-related 121 289 IPR021825 -
Lele44g1073 360 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 111 338 - -
Lele44g1073 360 MobiDBLite consensus disorder prediction 341 360 - -
Lele44g1073 360 MobiDBLite consensus disorder prediction 65 104 - -
Lele44g1073 360 MobiDBLite consensus disorder prediction 334 360 - -
Lele44g1073 360 MobiDBLite consensus disorder prediction 85 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1073 Lele-ChrLele44 19430454 19431536 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0281 41 2295834 2303823 Lele44g1073 44 19430454 19431536 hybridization
Lele42g0276 42 2347543 2348616 Lele44g1073 44 19430454 19431536 hybridization