Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1072 ATGCAATACGGTGCCGTTTCAAGCCCCCAAATTCCACCCCATTCCTCCTCAATCCCTAATCAGCTTCTCCATTTCGCACCACGTAGACGCCATCCGTTCTCTTCGTCGTCTACTTTGAGCTTCACCAGCACAGCAGCTCTTTGCACCGTCGCCACCTGCCGGCCACCGTTGACGTCCAGAAGCCACTTGTCAGCGCCGTCGGCCCACCCCCTTCCACCGCCTCATCGTCTACTCGCAGCTCGTGCTCGTCGTCGTCTCATCCTTCCCCTTCCCTATTTTCTGGCAAAACTGTTCGATTCATCTACATTGCCACAGATGACCTTAAATGTTTTTACCCTTTATTTCGTAGTATGAGGCCTAGAAAAGTATCTATCTTTTTTGTGCATCTGTGGGTTTCTGATGGATGATGCTGGGCATCGTGAAAATGGAAGGCACAAAGGCGATCAATATAAATCAGCTCAGGGGCAGTGGTTGATGCAACATCAACCTTCCATGAAGCAAATCATGGCAATTATGGCTGAAAGAGATGCAGCCATTCAAGAGAGAAATCTAGCCCTTTCTGAAAAAAAGGCAGCCCTTGCAGAGCGTGATATGGCATTCTTGCAACGAGATACTGCCATCGCAGAACGGAATAATGCCATTATGGAACGAGATAATGCAATTGCTACGCTTCAGTATCGAGAGAACTCCTTAGCCAATGGTAGCATGCCTTCTTGTCCTCCAGGATGCCAAATTGCCCGAGGTGTCAAGCATGTGCATCATCCTCAGCAACAAGTACACCATTTAGCTCATATGGGTGAAACTTCTTACAGCACACGGGAAATGCACACTGGTGATGACCTTCCAACCGCATCCATGCCTAATGAAGCTGGGAAATCACGGCGCGCTAAGCGACCAAAGGATGTTAAGTCAATTTCACCTGGCAAGAAGACACCAAGAACTGCAAAAAAGCTCAAGAGGGAGGGTGAAGACTTAAATAAGATGATGTTTGGCAAGGCACATGAATGGAAGAGTGGTCAGGAAATGGTTAATGGAGGTGATGATCTTAACAAGCAGTTAGGCTCATCAAAGGAAGATTGGAAAGGTCAAGACTTGGGGTTGAACCAGGTAGTATATGATGAGTCAACAATGCCAGCACCTGTGTGCTCTTGCACTGGTGTTCTGAGACAGTGCTACAAATGGGGGAATGGGGGCTGGCAGTCTGCTTGTTGCACAACAACTCTATCAATGTATCCACTTCCAGCAGTGCCCAACAAGAGGCATGCTAGGGTTGGTGGACGAAAGATGAGTGGAGGCGCTTTCAATAAGCTTCTTAGCCGGCTTGCAGCAGAGGGCCATGATCTGTCAAACGCAGTTGACCTGAAGGACCACTGGGCCAAACATGGCACAAACCGTTATATCACAATCAAGTAG 1413 0.4834 MQYGAVSSPQIPPHSSSIPNQLLHFAPRRRHPFSSSSTLSFTSTAALCTVATCRPPLTSRSHLSAPSAHPLPPPHRLLAARARRRLILPLPYFLAKLFDSSTLPQMTLNVFTLYFVVXGLEKYLSFLCICGFLMDDAGHRENGRHKGDQYKSAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLALSEKKAALAERDMAFLQRDTAIAERNNAIMERDNAIATLQYRENSLANGSMPSCPPGCQIARGVKHVHHPQQQVHHLAHMGETSYSTREMHTGDDLPTASMPNEAGKSRRAKRPKDVKSISPGKKTPRTAKKLKREGEDLNKMMFGKAHEWKSGQEMVNGGDDLNKQLGSSKEDWKGQDLGLNQVVYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGGAFNKLLSRLAAEGHDLSNAVDLKDHWAKHGTNRYITIK 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1072 470 MobiDBLite consensus disorder prediction 291 307 - -
Lele44g1072 470 Pfam GAGA binding protein-like family 134 470 IPR010409 -
Lele44g1072 470 SMART GAGA_bind_2 134 470 IPR010409 -
Lele44g1072 470 Coils Coil 184 204 - -
Lele44g1072 470 MobiDBLite consensus disorder prediction 269 319 - -
Lele44g1072 470 PANTHER - 134 470 IPR010409 -
Lele44g1072 470 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1072 Lele-ChrLele44 19422268 19426317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1072 198 470 BBR or BPC Transcription factor family AT5G42520 64.483 1.07e-115 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele44g1072 GAGA_bind 3.3e-106 No_clan