Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1071 ATGGACTGGCAAGGTGGCGCACCCGCGAGTCCTAGTTCGATCACTGTTAAAAGGATCTTGCGATTGGAAATTCCGGTAGATACATACCCCAATTTCAACTTTGTTGGAAGACTTCTGGGACCTAGAGGCAACTCTCTGAAACGCGTAGAAGTTAGTACAGGATGCCGTGTGTATATTAGAGGAAAAGGATCGATAAAGGATCCAGACAAGGAAGAGAAATTAAGAGGAAGACCAGGCTATGAACATCTCAATGAACCGCTGCACATTTTGATCGAGGCTGATTTACTTGCAAGTATTGTTGACTTAAGGCTTAGACAGGCACAGGAAATTATAGAAGAATTGCTCAAACCTGTGGATGAGTCACAAGACTACATTAAGAGGCAGCAGTTGCGTGAACTAGCTATGCTGAATTCAAATTTTAGAGAAGAGAGTCCCGGACCAAGTGGTAGTGTATCTCCATTCAATTCTAGTGGAATGAAACGTGCAAAAACAGGTCGCTGA 501 0.4351 MDWQGGAPASPSSITVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVSTGCRVYIRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEADLLASIVDLRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSNFREESPGPSGSVSPFNSSGMKRAKTGR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1071 166 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 23 141 IPR036612 GO:0003723
Lele44g1071 166 MobiDBLite consensus disorder prediction 141 166 - -
Lele44g1071 166 CDD SF1_like-KH 21 141 - -
Lele44g1071 166 PANTHER RNA-BINDING PROTEIN RELATED 10 158 IPR045071 -
Lele44g1071 166 SMART kh_6 16 116 IPR004087 GO:0003676
Lele44g1071 166 Pfam KH domain 28 69 IPR004088 GO:0003723
Lele44g1071 166 Gene3D K Homology domain, type 1 6 147 IPR036612 GO:0003723
Lele44g1071 166 MobiDBLite consensus disorder prediction 140 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1071 Lele-ChrLele44 19419106 19420380 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1071 44 19419106 19420380 Lele37g1412 37 22844865 22849540 CCT
Lele44g1071 44 19419106 19420380 Lele38g1289 38 23635398 23640125 CCT
Lele44g1071 44 19419106 19420380 Lele39g0012 39 96635 101248 CCT
Lele44g1071 44 19419106 19420380 Lele40g1236 40 22136749 22141407 CCT
Lele44g1071 44 19419106 19420380 Lele44g1071 44 19419106 19420380 ECH
Lele41g0283 41 2305747 2318162 Lele44g1071 44 19419106 19420380 hybridization
Lele42g0277 42 2352877 2364707 Lele44g1071 44 19419106 19420380 hybridization