Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1060 ATGAAAGAATCAACAATAACCACACACAACGAAAACCAGATCATGGTTTCACAAAGTAGAATCAAGAAGAGAAGAAGGTGTCGTCTTCTTCTAGGTTTACTTCTACTTTTACTGATACTGATCTTCATTGTGGCTCTGGTTCTGGCCTTAACTGTGTTCAAGCCCAAGAACCCAACAGTTCAACTTTTGTCAGCTTCTCTTGACGGTGTATCACCAAGTGTCTCTTTCCCTGCAATTCAGGTTCATCTCAATCTCACTCTTGATATCAATCTCATGGTTCATAATCCAAACCATGCAAGCTTCAAGCATGAACAGGGCAAGAGCATACTGTTTTACAAGGGCAATCAGATCGGAGACACTGAGATCTTTCCCGGCGTACTTCCGGCCAAGGGGTCGGCGGTGCTTCCTAGCCGGCTTACGTTGCAGGTGGATAGGCTAGCATCCGATGTTACCAGTTTGATCGAAGATTTAATGGGTGGGGAACTGTCTATGGAATCTTCTACTCAGATTCCAGGCAGAGTCATTATTCTTGGATTCATTAAAAGACATGCTGTTGCACTTTCTGAATGTCAGTTCACTATTGACATTTCCGACAGGAAGATTCGGTCCCAATCTTGCAAAAATAAGACCAAGTTTTGA 639 0.4319 MKESTITTHNENQIMVSQSRIKKRRRCRLLLGLLLLLLILIFIVALVLALTVFKPKNPTVQLLSASLDGVSPSVSFPAIQVHLNLTLDINLMVHNPNHASFKHEQGKSILFYKGNQIGDTEIFPGVLPAKGSAVLPSRLTLQVDRLASDVTSLIEDLMGGELSMESSTQIPGRVIILGFIKRHAVALSECQFTIDISDRKIRSQSCKNKTKF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1060 212 Pfam Late embryogenesis abundant protein 91 188 IPR004864 -
Lele44g1060 212 Gene3D - 44 196 - -
Lele44g1060 212 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 18 208 - -
Lele44g1060 212 SUPERFAMILY LEA14-like 38 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1060 Lele-ChrLele44 19306680 19307318 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1060 44 19306680 19307318 Lele44g1060 44 19306680 19307318 ECH
Lele41g0294 41 2406197 2406838 Lele44g1060 44 19306680 19307318 hybridization
Lele42g0289 42 2461516 2462154 Lele44g1060 44 19306680 19307318 hybridization