Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1058 ATGGAAGGATTAGATGGGTTGATAGATAAGCTTTTAGAAGCGAGGAAAAACAGAGGCAAGAGGATTCAATTAATTGAGCCAGAAATTCGCAATCTCTGCCACACTGCTAAAGATATCTTCCTCAACCAACCAAACCTTCTTGAGCTTGAAGCTCCCATCAATGTTTGTGGGGACATACATGGCCAATACCCAGATCTGTTGAGATTGTTCGAGTACGGTGGTTTTCCGCCGCAATCGAATTACCTATTCCTCGGAGACTACGTCGACAGAGGGAAACAGAGTGTGGAAACCATATGTCTACTTCTCGCTTACAAGATCAAATTCCCGGAGAACTTTTTCCTTCTCCGAGGGAATCACGAATGCGCCTCCATTAACAGAATCTACGGATTCTACGACGAGTGCAAGAGGAGATTCAGCGTGCGACTCTGGAAGATCTTCACCGATTGTTTCAATTGCCTGCCCGTCGCAGCGGTAATTGACGACAAGATCCTGTGTATGCACGGCGGTCTGTCGCCGGGGATGGAGAACATGAATCAGATTAAGGATATAGAGAGGCCTGTGGATGTACCGGATCAGGGATTGTTGTGCGACTTGCTTTGGGCTGATCCGGATAGAGAAATCAAAGGTTGGGGTGAGAATGACAGAGGAGTGTCGTTCACTTTCGGAGCTGATAAAGTTGCAGAGTTCTTGAAGAAGAATGATCTGGATCTCATATGTCGCGCTCACCAGGTGGTGGAGGATGGGTATGAGTTCTTTGCCGAGAGACAATTGGTGACAATATTCTCAGCACCAAACTACTGTGGAGAGTTCAACAACGCAGGAGCACTCATGTGTGTGGACGAGACATTACTCTGTTCTTTTCAGATTCTCAAACCTTGGAAAGGAAAAGCCCCTCCTCCTCAACTTGAATAA 912 0.466 MEGLDGLIDKLLEARKNRGKRIQLIEPEIRNLCHTAKDIFLNQPNLLELEAPINVCGDIHGQYPDLLRLFEYGGFPPQSNYLFLGDYVDRGKQSVETICLLLAYKIKFPENFFLLRGNHECASINRIYGFYDECKRRFSVRLWKIFTDCFNCLPVAAVIDDKILCMHGGLSPGMENMNQIKDIERPVDVPDQGLLCDLLWADPDREIKGWGENDRGVSFTFGADKVAEFLKKNDLDLICRAHQVVEDGYEFFAERQLVTIFSAPNYCGEFNNAGALMCVDETLLCSFQILKPWKGKAPPPQLE 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1058 303 ProSitePatterns Serine/threonine specific protein phosphatases signature. 115 120 IPR006186 GO:0016787
Lele44g1058 303 PRINTS Serine/threonine phosphatase family signature 52 79 IPR006186 GO:0016787
Lele44g1058 303 PRINTS Serine/threonine phosphatase family signature 177 204 IPR006186 GO:0016787
Lele44g1058 303 PRINTS Serine/threonine phosphatase family signature 234 254 IPR006186 GO:0016787
Lele44g1058 303 PRINTS Serine/threonine phosphatase family signature 148 174 IPR006186 GO:0016787
Lele44g1058 303 PRINTS Serine/threonine phosphatase family signature 81 108 IPR006186 GO:0016787
Lele44g1058 303 PRINTS Serine/threonine phosphatase family signature 114 138 IPR006186 GO:0016787
Lele44g1058 303 PRINTS Serine/threonine phosphatase family signature 256 272 IPR006186 GO:0016787
Lele44g1058 303 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 13 295 - -
Lele44g1058 303 SMART pp2a_7 24 294 IPR006186 GO:0016787
Lele44g1058 303 CDD MPP_PP1_PPKL 4 292 - -
Lele44g1058 303 FunFam Serine/threonine-protein phosphatase 1 299 - -
Lele44g1058 303 Pfam Calcineurin-like phosphoesterase 52 244 IPR004843 GO:0016787
Lele44g1058 303 Gene3D - 2 297 IPR029052 -
Lele44g1058 303 Pfam Serine-threonine protein phosphatase N-terminal domain 4 50 IPR031675 -
Lele44g1058 303 SUPERFAMILY Metallo-dependent phosphatases 22 295 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1058 Lele-ChrLele44 19293720 19294821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1058 31 238 Calmodulin-binding Proteins AT5G63870 30.645 2.29e-29 112