Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1056 ATGGGCAATTGTGGCACCAGAGAGGAATCCGCTGTTGTCTCCAATGCTCAAGTTCAACAGCTGCATATGTCGTCCTTGACTTCTAAAAGTGCTGCCAACGAGAAGAAGCATAATCGGTCTGTGTCAGATCTGAGTGACATTTCTACCCCGCGCCATAACTTCGATGATGTCAGGAAGAATACACTACTCTATACTCATGTCATTGCTTTTACATTGTATGAGCTCGAGACTATTACTAAGAGTTTTCGCTCCGATTATATCCTCGGAGAAGGGGGCTTCGGCACTGTCTATAAAGGTTACATTGACGAGAATGTGAGAGTTGGGCTCAAATCCCTTCCTGTTGCTGTCAAGGTTCTAAACAAGGAGGGTCTTCAGGGACATCGCGAGTGGCTTACAGAAATCAATTTCCTGGGACAGCTTAGGCATCCTAATTTGGTTAAGTTGATCGGATACTGCTGTGAGGACGATCATAGGCTACTTGTATACGAGTTCATGTTTCGAGGAAGTTTAGAGAATCATCTATTCCGAAAGGCAACTGTTCCTTTATCATGGGCTACAAGAATGATGATTGCCCTTGGAGCTGCTAAGGGGCTTGCTTTTCTTCATAATGCTGAAAGGCCAGTAATCTATCGAGACTTCAAAACTTCTAATATATTATTGGACTCCGATTATACAGCGAAGCTTTCTGATTTTGGACTAGCAAAAGCTGGACCACAAGGTGATGAAACCCATGTGTCCACCAGGGTTATGGGTACCTATGGGTATGCTGCCCCTGAATATGTAATGACTGGCCACCTGACTGCAAGGAGTGATGTGTATAGCTTTGGAGTTGTTCTTTTGGAACTTTTAACCGGAAGGAAATCTGTTGACAAAACAAGACCGGGTAAGGAACAAAGCTTGGTGGATTGGGCTAGGCCAAAGCTTAATGACAAGAGAAAGCTCCTGCAGATACTCGATCCTAGATTGGAAAACCAATACTCAGTGAGGGCAGCACAGAAAGCATGTAGCTTGGCTTACTACTGTCTGAGTCAAAATCCCAAAGCCAGGCCGCTCATGAGTGACGTAGTTGAGACATTGGAACCTTTACAAAGTTGTAGCGATGGGGCTGGTGAAGTGTCATCATTGGGATCAAGTAATGCAGGTCGTGGCCCCTTCGCCATGACTGGAATCTCTGACTATCGGATGTGCCAGAGTTTTTCAAACAATGTCGGTCCAGGCGCTAGTTGTTGGTCTCCGAACCCAAACTGCTCACCAGGTGCCCCTCCAGCATGCAGGGAAACTGAGGAAGATCGGTGTCCCTTTGAGATGCTTAAGGATGTTGTTATGATTTTTCTTTTCTTGAAGCCTAAGAGAATTTCTGCTGCCCTTTTCTCTAACATTTCTGCTGCGTTCAATTTCGCAGCCGAAAGGGACCCTCCCTCGGTCTCTCCAAAGAAACATGTTGTTGTTGTAGTTGAGTTGTTTGGTGAGGGCAGTATAATAGTAGAGAATAGGCATGCTCAGTCATTGTACTTTGTTCCATGGGAGTTTCTTTAG 1536 0.4525 MGNCGTREESAVVSNAQVQQLHMSSLTSKSAANEKKHNRSVSDLSDISTPRHNFDDVRKNTLLYTHVIAFTLYELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEINFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSVDKTRPGKEQSLVDWARPKLNDKRKLLQILDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSCSDGAGEVSSLGSSNAGRGPFAMTGISDYRMCQSFSNNVGPGASCWSPNPNCSPGAPPACRETEEDRCPFEMLKDVVMIFLFLKPKRISAALFSNISAAFNFAAERDPPSVSPKKHVVVVVELFGEGSIIVENRHAQSLYFVPWEFL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1056 511 Pfam Protein tyrosine and serine/threonine kinase 87 359 IPR001245 GO:0004672|GO:0006468
Lele44g1056 511 MobiDBLite consensus disorder prediction 24 45 - -
Lele44g1056 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Lele44g1056 511 FunFam Serine/threonine-protein kinase BIK1 49 164 - -
Lele44g1056 511 ProSitePatterns Protein kinases ATP-binding region signature. 88 117 IPR017441 GO:0005524
Lele44g1056 511 ProSiteProfiles Protein kinase domain profile. 82 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele44g1056 511 FunFam Probable serine/threonine-protein kinase PBL8 165 378 - -
Lele44g1056 511 PANTHER OS01G0588500 PROTEIN-RELATED 37 363 - -
Lele44g1056 511 Gene3D Phosphorylase Kinase; domain 1 40 164 - -
Lele44g1056 511 SUPERFAMILY Protein kinase-like (PK-like) 58 360 IPR011009 -
Lele44g1056 511 CDD STKc_IRAK 88 362 - -
Lele44g1056 511 Gene3D Transferase(Phosphotransferase) domain 1 165 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1056 Lele-ChrLele44 19268723 19273693 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1056 70 369 Glycoside Hydrolase AT3G07070 53.795 6.18e-108 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele44g1056 PK_Tyr_Ser-Thr 9.2e-48 CL0016