Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1049 ATGGATCGTACTGGCAACAAGCAGCAGCAGCAGCAGACTCAGGTGTCCTTGGGAAAGAGTTCAAGGCATCGATGCAGCAAATGGATTTTTCGGGATGTACCAAGTGACATAACCATAGATGTGAGTGGAGTAACATTTTCTTTGCATAAGTTTCCTCTTGTTTCTAGAAGTGGGCGAATACGGAGCTTAGTTGCAGAACATAGGGATTCTGATATCTCAAGAGTTGAGCTTCTTAATTTACCAGGTGGTCCTGGGTCCTTTGAGCTGGCTGCGAAATTCTGCTACGGTATAAACTTTGAAATTACATCTAAAAATGTTGCTCAGCTCTGTTGTGTTTCTGATTACCTTAAAATGACCGAAGAATTCTCGAAAGACAACCTCGGCTCCAGGGCTGAGGAATATCTAGATAGCGTTGTTTGCAAGAACCTTGAAATGTGTATTGAAGTCTTGCAACAGTGTGAAAACCTACTCCCCCTTACTGATGAACTAAAAATAGTTAACCGTTGCATAGAAGCAATCGCCTCAAAAGCTTGTGCAGAGCAAATAGCTTCTAGTTTCTCAAGGTTAGAGTATAGCAGCTCAGGGAGGCTACACATGAGCAGGCAAGCCAAATGTGATGCTGACTGGTGGATAGAAGATCTTTCTGTTCTTCCAATTGACATGTATCAACGAGTCATAACCGCGATGAAATGTCGCGGGGTCAGGCCTGAGAGCATTGGTGCCTCCCTTGTAAGTTATGCTCAGAAAGAATTAACAAAGAAATCCAGCTTGTGGAATCCCTCTAACCAGACTAATAACAAAGCTGATTCTGATTTAATTGACCATGAAAAGCTTGTGGTTGAGACTATAGTAATCCTTTTGCCAGTTGAGAAGCTTGCTGTTCCAATCACTTTCCTTTTCGGGCTTCTTCGAAGCGCGGTGATGCTTGATTGTGCTATTGCTTCTAGACTTGACCTAGAAAGAAGGATTGGTTCACATCTTGATGTTACAACTATTGATGATCTTCTGATTCCATCATTTAAGCATGAAGGTGATACCTTATTTGATGTAGACACAGTGCATAGGATTTTGTTAAACTTCTGTCAGCAGGATGATGGTGAAGATGATGATCTGGATGATGTTTCTGTTTTCGAATCCGATAGCCCTTGTTCTCCTTCACAATCAGCATTAGTTAAAGTGGCAAAATTAGTGGACAATTACCTCGCTGAAATTGCCCCTGATGCAAACCTGAAGCTTTCAAAGTTTATGGTCATCGCAGAAACCTTACCAGCACATGCACGAACGGTTCACGATGGCCTATATCGAGCCATTGACATTTATTTGAAAGCTCATCCAGGCTTATCAGAGTTGGACAAGAAGAAGCTATGCAAATTGCTCGATTTCCAAAAGCTTTCACAAGAAGCCGGGGCTCACGCTGCGCAAAACGAGCGCCTACCTCTGCAGTCAATAGTACAAGTTCTTTACGTTGAGCAATTAAGGTTAAGAAATACCTTGTGCTGCTCCTCTTTGGAAGATGATCCTAGGCCAATGCACCACCAGTCATGGCGCATGAGCAGTGGAGCATTAAGTGCAGCAATGTCTCCCCGAGACAACTACGCATCATTGAGACGAGAAAATCGCGAGTTGAAACTCGAGCTAGCTCGGTTAAGAATGAGATTGAATGATCTGGAGAGGGACCATGTGTTCTTGAAAAGGGATATGGCAAAGTCTGGTTCAAGAAAATTCATGAGTTCTTTCTCAAGAAGGATCAGTAAGCTTAACTTCTTTGGACTTGGCTCTTCTGGAGGATCTAGTTCTCCTCCATCAAGGAATTCTCAGAGAATAGATTCAAAGGTGATTGAGAGAACTTGTGCTAGCACTGAGTAG 1866 0.4287 MDRTGNKQQQQQTQVSLGKSSRHRCSKWIFRDVPSDITIDVSGVTFSLHKFPLVSRSGRIRSLVAEHRDSDISRVELLNLPGGPGSFELAAKFCYGINFEITSKNVAQLCCVSDYLKMTEEFSKDNLGSRAEEYLDSVVCKNLEMCIEVLQQCENLLPLTDELKIVNRCIEAIASKACAEQIASSFSRLEYSSSGRLHMSRQAKCDADWWIEDLSVLPIDMYQRVITAMKCRGVRPESIGASLVSYAQKELTKKSSLWNPSNQTNNKADSDLIDHEKLVVETIVILLPVEKLAVPITFLFGLLRSAVMLDCAIASRLDLERRIGSHLDVTTIDDLLIPSFKHEGDTLFDVDTVHRILLNFCQQDDGEDDDLDDVSVFESDSPCSPSQSALVKVAKLVDNYLAEIAPDANLKLSKFMVIAETLPAHARTVHDGLYRAIDIYLKAHPGLSELDKKKLCKLLDFQKLSQEAGAHAAQNERLPLQSIVQVLYVEQLRLRNTLCCSSLEDDPRPMHHQSWRMSSGALSAAMSPRDNYASLRRENRELKLELARLRMRLNDLERDHVFLKRDMAKSGSRKFMSSFSRRISKLNFFGLGSSGGSSSPPSRNSQRIDSKVIERTCASTE 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1049 621 SMART BTB_4 35 127 IPR000210 GO:0005515
Lele44g1049 621 MobiDBLite consensus disorder prediction 592 621 - -
Lele44g1049 621 PANTHER OS12G0117600 PROTEIN 32 583 IPR043454 -
Lele44g1049 621 ProSiteProfiles NPH3 domain profile. 208 493 IPR027356 -
Lele44g1049 621 Coils Coil 532 566 - -
Lele44g1049 621 SUPERFAMILY POZ domain 28 120 IPR011333 -
Lele44g1049 621 Gene3D Potassium Channel Kv1.1; Chain A 22 140 IPR011333 -
Lele44g1049 621 Pfam NPH3 family 208 468 IPR027356 -
Lele44g1049 621 Pfam BTB/POZ domain 35 119 IPR000210 GO:0005515
Lele44g1049 621 ProSiteProfiles BTB domain profile. 35 103 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1049 Lele-ChrLele44 19206818 19210145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g1049 35 569 EF-hand Containing Proteins AT3G44820 33.925 1.71e-108 339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele44g1049 44 19206818 19210145 Lele44g1049 44 19206818 19210145 ECH
Lele41g0009 41 75166 78667 Lele44g1049 44 19206818 19210145 hybridization
Lele42g0016 42 112024 116339 Lele44g1049 44 19206818 19210145 hybridization