Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0987 ATGAGTTATTGGTCACCAGCATCTGTTTTTACTAATCAACTTATACCACTGTCTGCTGCAAGCACCAAATCTTACGTTAATATCAAAAGCAGCACCAGTTTTATATGTAGTCCAAGCCAAGGAAGGTGCTATCTCTCTGTTCCTGAGAACCATTATAAAGTCAGGAGACTCAGGATTTCTGGGATAATTAAAGCTAGACAAGGATTGACGCAGTTTCAGGCGCAACAAGGAACTTGGGAAGAACCTGATGATGGAAGCGATAGTGAGTATGATGAAGAAGAAGACGAGGAAATGGAAGATGAGAACTATGGCTTTGAAAGTGATTGGGAAGGGGAAGAGATAACATCATCAGCTGTTAATGGTGTTATTTCAGTGGACAAGTATGGGGAGGATATTAAAAAAGAGGTTGAACAGCTTTTGGAGCCTGAAGAAAGAGCAGTCTTGCAACAGAATGTGACTCCAAACTTGGAAAAAATTTCAACTGAAAAATGGAGCCCACTGCACACTTTAGCGCTATCAACACAGATAAAATGTATGGATCAGCTGCTTGAAAGTGGTGTTGATATTGATCTTAAGAACAAGGAAGGTCTCACCGCACTTCATATAGCTATCATAGGAAAGAAAGAAGCTGTAATAAGCCATCTTTTACGGAAAGGTGCAAGTCCTCATGTCAAGGATAAGGATGGTGCTACCTCACTTCATTATGCAGTTGAAGTTGGTGCCAAGCAAACTGTAAAGTTATTGATCAAATATAAGGTTGACGTCAACGTTGCAGATAATGAAGGTTGGACCCCATTGCATGTTGCTATTCAAAGCAGAAATAGAGATATTGCAAAAATTTTGTTAGTCAATGGTGCGGACAAGACAAGAAGAAATAAGGATGGGAGAACAGCATTGGATCTAAGTTTATGTTATGGGAAGGACTTCAAGTCTTATGACCTTGGCAAATTATTGAAGGTAGTTGCAGGTTTTGTTCTCTGCTTTTGTTTTTCTTCTCGAAACTTCGTTACAGTCTTCTCTGTGTTTCCTAAATTCTCGCGTCCCCAGATGGATGAGGATTTCGATATGCCCCCGTCGGAGGAGATGAACGAGGACTTCGATCTCACCGGTGATGCCCCCACTCTTAAGGTTGGAGAGGAGAAGGAGATCGGCACGCAGGGCTTGAAGAAGAAGCTCCTCAAAGAAGGTGAAGGCTGGGACACACCTGACGTGGGCGATGAAGTTGAAGTTCATTACACGGGAACGTTGCTTGATGGGACCAAGTTTGATTCGAGCCGCGACAGGGGAACCCCCTTTAAGTTTACGCTCGGACAAGGGCAAGTAATTAAAGGGTGGGATCAGGGTATTAAAACCATGAAGAAAGGTGAAAATGCTATTTTCACCATCCCTCCTGAACTAGCATATGGTGAATCTGGTTCTCCTCCGACCATTCCTCCTAATGCTACTCTTCAATTTGATGTTGAGCTCGTGTCTTGGACCAGTGTGAAGGACATATGCAAGGATGGTGGCATATTTAAGAAAATACTTACTGAAGGAGAGAAATGGGAGAACCCCAAAGATCCTGATGAAGTTTTAGTTAAATATGAAGTTCGGCTTGAGGATGGAACACTCGTATCAAAATCTGATGGGGTGGAGTTTACAGTGACAGAGGGTTACTTTTGTCCTGCGTTTGCAAAGGCTGTGAAAACCATGAAGAAGGGAGAGAAAGTGCTTTTAATGGTGATGCCACAATATGGTTTTGGCGAGAAGGGTAAAGCAGCACACGGTGATGAAGGTGCAGTTCCACCAAATGCATCCTTGCAGATAACTCTTGAATTGGTGTCTTGGAAGACTGTTTCAGAAGTAACTGATGATAAGAAGGTGATCAAGAAAATCCTCAAAGAAGGGGAAGGATACGAGCGTCCAAATGAAGGAGCTGTTGTGCAAGTGAAATTGATTGGAAAACTGCAAGATGGCACTGTCTTCTTGAAGAAGGGCCATGATGAAGAGCTGTTTGAATTCAAAACAGATGAAGAGCAAGTCGTTGATGGACTTGATAGAGCAGTGTTGACTATGAAAAAGGGTGAAGTAGCATTATTGACTGTTGCACCTGAGTACGCCTTTGGTTCATCCGAGTCCAAGCAAGAATTAGCTATTGTTCCTCTCAACTCAACTGTTTACTATGAAGTCGAGCTAGTATCATTTGTGAAGGAGAAGGAGTCCTGGGATATGAACACACAGGAGAAGATTGAAGGTGCTGGTAAGAAGAAAGAAGAAGGAAATGCCTTGTTTAAGAGTGGAAAATATGCTAAAGCTTCTAAAAGATATGAGAAGGCTGTCAAGTACATAGAGTATGATTCTTCCTTCAGTGAAGAGGAGAAGAAGCAGGCCAAGGCACTGAAGATTGCTTGCAATCTCAACAATGCGGCTTGCAAGTTGAAGTTGAAAAATTATAAAGAAGCTGAGAAATTGTGTACTAAGGTTCTGGATCTTGAAAGCACAAACGTAAAGGCACTTTATAGAAGAGCACAGGCATGCATCGAGTTGGCTGACTTGGATTTGGCAGAAGTTGATATTAAGAAAGCTCTCGAGATAGACCCTAACAACAGGGATGTGAAGTTGGAGTACAGGACTTTGAAGGAAAAGGTGAAGGAGTTTAACAGAAAGGAGGCTAGATTTTATGGAAACATGTTTGCCAAGATGACTAAGCCGGATCCAAATGAAAATAATAAAGCAGCGAACAAGGATGCTGAACCCATGAGCATTGACAGCAAAGCGTAA 2760 0.4217 MSYWSPASVFTNQLIPLSAASTKSYVNIKSSTSFICSPSQGRCYLSVPENHYKVRRLRISGIIKARQGLTQFQAQQGTWEEPDDGSDSEYDEEEDEEMEDENYGFESDWEGEEITSSAVNGVISVDKYGEDIKKEVEQLLEPEERAVLQQNVTPNLEKISTEKWSPLHTLALSTQIKCMDQLLESGVDIDLKNKEGLTALHIAIIGKKEAVISHLLRKGASPHVKDKDGATSLHYAVEVGAKQTVKLLIKYKVDVNVADNEGWTPLHVAIQSRNRDIAKILLVNGADKTRRNKDGRTALDLSLCYGKDFKSYDLGKLLKVVAGFVLCFCFSSRNFVTVFSVFPKFSRPQMDEDFDMPPSEEMNEDFDLTGDAPTLKVGEEKEIGTQGLKKKLLKEGEGWDTPDVGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFTLGQGQVIKGWDQGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELVSWTSVKDICKDGGIFKKILTEGEKWENPKDPDEVLVKYEVRLEDGTLVSKSDGVEFTVTEGYFCPAFAKAVKTMKKGEKVLLMVMPQYGFGEKGKAAHGDEGAVPPNASLQITLELVSWKTVSEVTDDKKVIKKILKEGEGYERPNEGAVVQVKLIGKLQDGTVFLKKGHDEELFEFKTDEEQVVDGLDRAVLTMKKGEVALLTVAPEYAFGSSESKQELAIVPLNSTVYYEVELVSFVKEKESWDMNTQEKIEGAGKKKEEGNALFKSGKYAKASKRYEKAVKYIEYDSSFSEEEKKQAKALKIACNLNNAACKLKLKNYKEAEKLCTKVLDLESTNVKALYRRAQACIELADLDLAEVDIKKALEIDPNNRDVKLEYRTLKEKVKEFNRKEARFYGNMFAKMTKPDPNENNKAANKDAEPMSIDSKA 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0987 919 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 401 490 IPR001179 GO:0003755
Lele44g0987 919 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 632 726 IPR001179 GO:0003755
Lele44g0987 919 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 516 606 IPR001179 GO:0003755
Lele44g0987 919 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 521 610 IPR001179 GO:0003755
Lele44g0987 919 ProSiteProfiles Ankyrin repeat profile. 195 227 IPR002110 GO:0005515
Lele44g0987 919 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 405 493 IPR001179 GO:0003755
Lele44g0987 919 FunFam Peptidylprolyl isomerase 734 889 - -
Lele44g0987 919 Gene3D - 497 610 IPR046357 GO:0003755
Lele44g0987 919 Coils Coil 862 882 - -
Lele44g0987 919 Gene3D - 381 496 IPR046357 GO:0003755
Lele44g0987 919 ProSiteProfiles Ankyrin repeat region circular profile. 228 260 - -
Lele44g0987 919 MobiDBLite consensus disorder prediction 891 919 - -
Lele44g0987 919 Pfam Ankyrin repeats (3 copies) 211 292 IPR002110 GO:0005515
Lele44g0987 919 PANTHER PEPTIDYLPROLYL ISOMERASE 355 495 - -
Lele44g0987 919 ProSiteProfiles Ankyrin repeat region circular profile. 261 287 - -
Lele44g0987 919 FunFam Peptidylprolyl isomerase 378 496 - -
Lele44g0987 919 Gene3D - 229 308 IPR036770 -
Lele44g0987 919 Gene3D - 129 228 IPR036770 -
Lele44g0987 919 ProSiteProfiles Ankyrin repeat profile. 162 194 IPR002110 GO:0005515
Lele44g0987 919 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 638 729 IPR001179 GO:0003755
Lele44g0987 919 SUPERFAMILY FKBP-like 382 498 - -
Lele44g0987 919 Gene3D - 611 731 IPR046357 GO:0003755
Lele44g0987 919 Gene3D Tetratricopeptide repeat domain 732 889 IPR011990 GO:0005515
Lele44g0987 919 FunFam Peptidylprolyl isomerase 611 731 - -
Lele44g0987 919 ProSiteProfiles Ankyrin repeat region circular profile. 195 227 - -
Lele44g0987 919 ProSiteProfiles TPR repeat profile. 829 862 IPR019734 GO:0005515
Lele44g0987 919 MobiDBLite consensus disorder prediction 73 105 - -
Lele44g0987 919 SUPERFAMILY FKBP-like 497 613 - -
Lele44g0987 919 Pfam Ankyrin repeats (many copies) 164 210 IPR002110 GO:0005515
Lele44g0987 919 SUPERFAMILY FKBP-like 615 747 - -
Lele44g0987 919 SUPERFAMILY Ankyrin repeat 154 306 IPR036770 -
Lele44g0987 919 SMART tpr_5 829 862 IPR019734 GO:0005515
Lele44g0987 919 SMART tpr_5 795 828 IPR019734 GO:0005515
Lele44g0987 919 SMART tpr_5 746 779 IPR019734 GO:0005515
Lele44g0987 919 SMART ANK_2a 162 191 IPR002110 GO:0005515
Lele44g0987 919 SMART ANK_2a 195 224 IPR002110 GO:0005515
Lele44g0987 919 SMART ANK_2a 261 290 IPR002110 GO:0005515
Lele44g0987 919 SMART ANK_2a 228 257 IPR002110 GO:0005515
Lele44g0987 919 Pfam Tetratricopeptide repeat 830 862 IPR019734 GO:0005515
Lele44g0987 919 FunFam Peptidylprolyl isomerase 497 610 - -
Lele44g0987 919 ProSiteProfiles Ankyrin repeat profile. 261 293 IPR002110 GO:0005515
Lele44g0987 919 ProSiteProfiles Ankyrin repeat profile. 228 260 IPR002110 GO:0005515
Lele44g0987 919 SUPERFAMILY TPR-like 734 894 IPR011990 GO:0005515
Lele44g0987 919 MobiDBLite consensus disorder prediction 82 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0987 Lele-ChrLele44 18644957 18654671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0987 350 894 Calmodulin-binding Proteins AT3G25230 80.510 0.0 882