Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0976 ATGGGTCATTTTAACACCGTATCATCACTCGTTCGTATAAATAACGTTTTGAAAACCCTAGCTCCCCGAACACTTGAGTTCATCTTAGCGTCCCCAGGTTCAGATTGCCGAGCTGCTCTGCAAGCAGATCTGTGTGAGACAAAATGGCGGAAAATTTCTGTTAAGCCCAGCTGGCGTAGGCCGAAGGGTATTGATTCCCGGGTAAGGAGAAAGTTCAAAGGATGCACCTTGATGCCAAATATTGGTTACGGTTCAGACAAGAAGACCCGTCACTATCTCCCTAATGGATTCAAGAAATTTGTTGTTCACAATGTGAATGAGCTGGAACTCTTGATGATGCACAACAGGACTTACTGTGCTGAGATCGCACACAATGTGTCAACCAGGAAACGAAAGGAGATTGTCGAGCGGGCAGCACAGTTGGACGTTGTTGTTACCAACAGAACAGCGAGGTTGCGTAGCCAAGAGGACGAGTGA 477 0.4675 MGHFNTVSSLVRINNVLKTLAPRTLEFILASPGSDCRAALQADLCETKWRKISVKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNRTARLRSQEDE 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0976 158 SUPERFAMILY Ribosomal protein L32e 49 156 IPR036351 -
Lele44g0976 158 SMART Ribosomal_L32e_2 47 147 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele44g0976 158 CDD Ribosomal_L32_L32e 49 147 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele44g0976 158 Pfam Ribosomal protein L32 48 147 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele44g0976 158 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 48 158 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0976 Lele-ChrLele44 18510486 18512690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0976 50 158 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 89.908 7.79e-72 210
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0385 41 3133047 3137882 Lele44g0976 44 18510486 18512690 hybridization