Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0940 ATGTCTTCCTTTTTCAGAGTCCTTGTCGGCGAATATGCTGCTAAATTGTTTCTGGTTTTGTTCCGTTCGTTGATTGATTTTGCGTATTCCACTTCTCAGATTCGATCGGACTCTGTTCTTTTGCGAATCCCTCCCCTGTTCGTCTCCAGATTTTCTTGTCTTACACCAAAACCAGTAACACTTTTCTGTTCTTCACAAAGATCATGGACGGTTGATATTGAGGAAGAAGATAACAAAGAATTGTATTTCAAAAGAGGTTGGAATACATTTGTGGAAGAAAATGCTTTAGAAACAGGGGAGTTCATAGTTTTCAAATTTGATGTGCAGCGAATCCCTTTGTTGTTCGTTGCCCGATATTCTACTCTTGTCCCAAGAAGATTAACATTTATAAGGGCTTCTTCAAACAGATCATGGAAGGTTGATATTGAGGAAGAAGATGACAAAAGGTTTTATTATAAAAGTGGTTGGAGTAAATTTGTAGAAGATAATGCTGTGGAAATTGCACAGCTTCTGGTTTTCAAATTTGTTGGGGACTCAACATTTAAAGTTAAGATCTTTGGGAACTCTGCTTGCGAGAAGGAGCTCGAGAATCTGCCATGTGTCAATCAGAATTACTGCATACAGCATCATATAAAACAAACAGCAACTCAAGATCATCAAGAAAATCAGAAAGAAGAAAGAGATCCAAATCCAATTGATGATGTAGGTGGACAAAAGTCGAAGATCGATGATGTAGATGGACAAAAGTCGAAGATCGATGATTTGGATGGACAAAAGTCGAAGCCAAATGTTGAGACTACGGTGGAGACGGTAGATGTAGATGATGATGATCATGATCATGATGGCAATTCTATACAAGAAACTGAGGCTCCCCAGGAAAAAGTTGAAGAACAAAGCGATGAACCTATTGTTATTGAACCTGATCAATCTCATAGCCCTATGAAGAAGAGAACTGGCGGCCGCGAGTACGAGGGACCGATGATTAAAGCATCTAGCAAACGCCCCAAGTTGGACTCTAAGAAGAATCCTTCATTCAAAATTTTCCTGCAACCAGCCTATGCTGAAAAGGGTGTCATGTGTGTTCCAACGGAGTTCTTCCAGAAGCATATGAAGAACAAGAGACAAGAGGCTGAATCGCTCTTCATAGCGTTTCAAATCTGTCAGCTTTCCTCTCTTCTTCAAGCTAATGCTCCGGCCGATTTAGTGAAAGAGAAGAAAGCTCGATCGGTGACTATGTCTTGTTTCTTCAGAGTCCTCATTGGAGAGTGGACGACTAAACTGAGAATCCCTCGGCTGTTCGTCTCCAGCTTTAGTCTTACGCCCAAGAGAGTAATAATCATCAATTCTTCTTCAGAAGGACTATGGATGGTTGATATGGAGGAAGAAGAAGATAAAAACGAATTGTACTTCAAAAGGGGTTGGGCTAAATTTGTAAAAGACAATGCTTTAGAGACTGGGGACTTCATAGTTTTCCAATTTAATGGGAAATCAAGATTCAATGTTACTCTCTGTGGAAAATCTGCCTGCGAGAAGAAGCTCGAGATCAGTTGGGCAAAGGCATCACATAGCGATCAGAATCATCACAAACGGAAAGGAAAAGATCCGATTGATGATGTTGAAAGACCAACTGTGAAGCTCAAGCTTGATCATGCTAAGATCAAGGAGGAGACAATGGATTTCCACGATTATGGCACCTCTAGCCAAGAAACGTTTTCTTGGGATGAAACATGGGAATCCCAGTCTGAAGATGAAGATGAAGATGAAGAAGATGATGATGATGAAGAAGAAAGTGATGAGTTTAATGATATTAAATCTGACCCTCATGATTCTATCGTGAATAATGGGGAAGGCTGCCACTTGGGCTCTGTGATTCCTTCATTCTCAGTACATCTCCAACCTGCCTACGCAAAAGGGGGTTGCATGTGCATTCCAACAGATTTCTTCAAGGAGCACATAAGAAAAGAGAAACAAGAGGTGGAGATTGAGACCATGAAAGGAGTATGGAAAGTCACATTACTTCCCCACAAGAAAAGAGAACGTACATTCGCTAGGTTCAGTAAAGGTTGGTCGGAGTTTGCCAGACTGAATCGTTTTAAGATCGGACAGACTCTCTATTTTAAAATGGTTCGGAGAGGTAAGTGTCCCAAGTTCATTGTTAGTAGGCAAAAGTCCATCGAGTAA 2181 0.4076 MSSFFRVLVGEYAAKLFLVLFRSLIDFAYSTSQIRSDSVLLRIPPLFVSRFSCLTPKPVTLFCSSQRSWTVDIEEEDNKELYFKRGWNTFVEENALETGEFIVFKFDVQRIPLLFVARYSTLVPRRLTFIRASSNRSWKVDIEEEDDKRFYYKSGWSKFVEDNAVEIAQLLVFKFVGDSTFKVKIFGNSACEKELENLPCVNQNYCIQHHIKQTATQDHQENQKEERDPNPIDDVGGQKSKIDDVDGQKSKIDDLDGQKSKPNVETTVETVDVDDDDHDHDGNSIQETEAPQEKVEEQSDEPIVIEPDQSHSPMKKRTGGREYEGPMIKASSKRPKLDSKKNPSFKIFLQPAYAEKGVMCVPTEFFQKHMKNKRQEAESLFIAFQICQLSSLLQANAPADLVKEKKARSVTMSCFFRVLIGEWTTKLRIPRLFVSSFSLTPKRVIIINSSSEGLWMVDMEEEEDKNELYFKRGWAKFVKDNALETGDFIVFQFNGKSRFNVTLCGKSACEKKLEISWAKASHSDQNHHKRKGKDPIDDVERPTVKLKLDHAKIKEETMDFHDYGTSSQETFSWDETWESQSEDEDEDEEDDDDEEESDEFNDIKSDPHDSIVNNGEGCHLGSVIPSFSVHLQPAYAKGGCMCIPTDFFKEHIRKEKQEVEIETMKGVWKVTLLPHKKRERTFARFSKGWSEFARLNRFKIGQTLYFKMVRRGKCPKFIVSRQKSIE 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0940 726 ProSiteProfiles B3 DNA-binding domain profile. 124 189 IPR003340 GO:0003677
Lele44g0940 726 MobiDBLite consensus disorder prediction 521 541 - -
Lele44g0940 726 MobiDBLite consensus disorder prediction 571 612 - -
Lele44g0940 726 Gene3D - 408 509 IPR015300 -
Lele44g0940 726 Gene3D - 26 108 IPR015300 -
Lele44g0940 726 Gene3D - 109 191 IPR015300 -
Lele44g0940 726 ProSiteProfiles B3 DNA-binding domain profile. 26 120 IPR003340 GO:0003677
Lele44g0940 726 SUPERFAMILY DNA-binding pseudobarrel domain 35 107 IPR015300 -
Lele44g0940 726 Gene3D - 614 723 IPR015300 -
Lele44g0940 726 ProSiteProfiles B3 DNA-binding domain profile. 412 507 IPR003340 GO:0003677
Lele44g0940 726 SUPERFAMILY DNA-binding pseudobarrel domain 623 712 IPR015300 -
Lele44g0940 726 PANTHER B3 DOMAIN-CONTAINING 110 286 - -
Lele44g0940 726 CDD B3_DNA 625 721 IPR003340 GO:0003677
Lele44g0940 726 Pfam B3 DNA binding domain 426 505 IPR003340 GO:0003677
Lele44g0940 726 Pfam B3 DNA binding domain 110 187 IPR003340 GO:0003677
Lele44g0940 726 Pfam B3 DNA binding domain 629 718 IPR003340 GO:0003677
Lele44g0940 726 Pfam B3 DNA binding domain 40 107 IPR003340 GO:0003677
Lele44g0940 726 SUPERFAMILY DNA-binding pseudobarrel domain 410 509 IPR015300 -
Lele44g0940 726 MobiDBLite consensus disorder prediction 216 260 - -
Lele44g0940 726 CDD B3_DNA 110 186 IPR003340 GO:0003677
Lele44g0940 726 CDD B3_DNA 41 107 IPR003340 GO:0003677
Lele44g0940 726 CDD B3_DNA 414 504 IPR003340 GO:0003677
Lele44g0940 726 MobiDBLite consensus disorder prediction 216 339 - -
Lele44g0940 726 ProSiteProfiles B3 DNA-binding domain profile. 626 723 IPR003340 GO:0003677
Lele44g0940 726 SMART B3_2 415 507 IPR003340 GO:0003677
Lele44g0940 726 SMART B3_2 29 118 IPR003340 GO:0003677
Lele44g0940 726 SMART B3_2 119 189 IPR003340 GO:0003677
Lele44g0940 726 SMART B3_2 627 723 IPR003340 GO:0003677
Lele44g0940 726 MobiDBLite consensus disorder prediction 277 301 - -
Lele44g0940 726 SUPERFAMILY DNA-binding pseudobarrel domain 109 191 IPR015300 -
Lele44g0940 726 MobiDBLite consensus disorder prediction 576 600 - -
Lele44g0940 726 MobiDBLite consensus disorder prediction 310 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0940 Lele-ChrLele44 18154065 18166382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0940 415 710 B3 DNA Binding Superfamily AT3G18990 22.289 3.46e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele44g0940 B3 8.7e-10 CL0405