Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0936 ATGAGCTCTAACTTGCAGAAACTCAAACATGGTAATACACAATATGAAGAAGCAGATGAGAACCTGCCACATCAAAGCGAGACAATACCGTTGTCATCGCCGCCTACGTGGGGGATCTCGGAGCCGCCATGGCCGTCCCATGTGGAGGAGGAGGACAACAACGAGGAAGAAGAAGTTGTGTATGCAGAGAAGGCGAAAGTGCAGATATTTGACTTGGAGTCTTCTTCTTCAGGCAGCAACTCCACGGCGGCGGTGGTGCCGCCATTCTCGTGGAGGAAGTTGTGGCTGTTCACGGGGCCGGGACTGCTAATGAGCGTGGCGTTTTTGGACCCTGGAAATTTGGAGGGTGATTTGCAGGCAGGAGCCATTGGAGGGTACTCATTGTTGTGGCTTTTGATGTGGACGACGATCATGGGGCTGCTGATACAGCTGTTGTCGGCGAGGCTCGGGGTGGCGACAGGGCGGCACTTGGCGGAGCTGTGCCGTGAGGAGTACACAAAGTGGGCGAGGTTGGTACTGTATGTGATGGCGGAAATGGCATTGATAGCTGCAGATATTCAAGAGGTTATTGGAAGTGCCATAGCCATTAAGATTCTAAGTCATGGCATTTTGCCTATTTGGGCAGGAGTCGTAATCACAGCCCTTGATAGCTTTGTGTTTCTGTTTCTTGAGAACTATGGAGTGAGGAAGCTGGAAGGTGTTTTCGCAATCTTCATTGGAACTATGGCCCTTTCTTTCGCTTGGATGTTCTTTGATACAAAGCCTAGCCCTAAACAACTTCTTATTGGTATTTTGGTGCCAAAAGTGAGCTCAAAAACCCTTCGTCAATCTGTGGAACTTATAGGCTGCGTTATAACCCCACACAACGTATTCCTCCACTCAGCTCTAGTTCAATCCAGAAACATAGACGTAAAAAACAAGGGCCAAGTCCAAGAGGCGCTAAACTACTACACAATTGAGTCCACACTCGCACTCATCATCACCTTCTTCATCAACCTCTCCGTCATGACAGTCTTCGCTAGGGTTTTCTACAACACCGAACAAGCCGATGCCATCGGACTCGTAAACGCGGGCCAGTACCTGCAAGAGAAATACGGCGGAGGGTTCTTCCCTATATTATATATATGGGGAATAGGGTTGTTGGCTGCAGGACAAAGTAGTACGATTACTGGTACTTATGCTGGGCAGTTTATTACAGAAGGGTTTCTGAAACTTCGTTTGAAGAAATGGTTAAGAGCTTTGATCACTAGAAGTCTTGCCATTGTTCCTACGATGGTTGTGGCTCTTATGTTTAATACTTCTGAAGGATCTTTGGATATTTTGAATGAGTGGCTCAATGTGGTTCAGTCTATTCAGATTCCTTTTGCTCTTATTCCTCTTCTTACTTTGGTTTCTAAAGAGGAAGTCATGGGCTCTTTCAGAATTGGACCCCTTGTGGAGAAAGTGGCATGGACAGTGGCAGTGCTGGTAATTCTGGTATATGGATACATGTTGCTGGACTTCTTCCTCTCAGAAGTGAAGGGACTTGTGTTTGGCTTTGTGATGTTCATTTGTGCATCAGCTTGGTTATCATTCATTGCTTATTTGGTTAAACACAGTGGTGCCTTCTCTTCTTTCTTCCTCACTTCTCCTCATTCTCGTGGCTTCTCCTCTCTTCCTTCCAATTAA 1668 0.467 MSSNLQKLKHGNTQYEEADENLPHQSETIPLSSPPTWGISEPPWPSHVEEEDNNEEEEVVYAEKAKVQIFDLESSSSGSNSTAAVVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIGGYSLLWLLMWTTIMGLLIQLLSARLGVATGRHLAELCREEYTKWARLVLYVMAEMALIAADIQEVIGSAIAIKILSHGILPIWAGVVITALDSFVFLFLENYGVRKLEGVFAIFIGTMALSFAWMFFDTKPSPKQLLIGILVPKVSSKTLRQSVELIGCVITPHNVFLHSALVQSRNIDVKNKGQVQEALNYYTIESTLALIITFFINLSVMTVFARVFYNTEQADAIGLVNAGQYLQEKYGGGFFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLRLKKWLRALITRSLAIVPTMVVALMFNTSEGSLDILNEWLNVVQSIQIPFALIPLLTLVSKEEVMGSFRIGPLVEKVAWTVAVLVILVYGYMLLDFFLSEVKGLVFGFVMFICASAWLSFIAYLVKHSGAFSSFFLTSPHSRGFSSLPSN 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0936 555 PRINTS Natural resistance-associated macrophage protein signature 446 465 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele44g0936 555 PRINTS Natural resistance-associated macrophage protein signature 277 300 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele44g0936 555 PRINTS Natural resistance-associated macrophage protein signature 203 222 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele44g0936 555 PRINTS Natural resistance-associated macrophage protein signature 173 199 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele44g0936 555 PRINTS Natural resistance-associated macrophage protein signature 228 249 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele44g0936 555 PRINTS Natural resistance-associated macrophage protein signature 384 403 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele44g0936 555 PRINTS Natural resistance-associated macrophage protein signature 412 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele44g0936 555 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 92 470 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele44g0936 555 MobiDBLite consensus disorder prediction 1 49 - -
Lele44g0936 555 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 79 530 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele44g0936 555 Hamap Divalent metal cation transporter MntH [mntH]. 80 502 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lele44g0936 555 Pfam Natural resistance-associated macrophage protein 115 476 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0936 Lele-ChrLele44 18081616 18087315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0936 53 533 Inorganic Solute Cotransporters AT1G47240 71.933 0.0 718