Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0929 ATGGCTTACGTCAAGGCTCAGAAATCAAAGGCCTACTTCAAGAGGTATCAAGTAAAGTTCAAGAGAAGAAGAGGTAATATTGCAATATATCAAGAGGGTAAAACTGACTACCGAGCCAGGATTCGGTTGATTAACCAGGACAAGAACAAGTATAACACCCCAAAGTACCGCTTTGTGGTTCGATTTACAAACAAGAATATCATTGCTCAGATAACATCTGCTAGTATTGCTGGGGATATTGTTCTTGCTGCCGCTTATGCACATGAGCTGCCACGCTATGGTTTGGAAGTAGGTCTCACAAACTATGCTGCAGCACTGGATGGTGGTCTGGATATTCCTCACAGTGATAAAAGGTTTGCTGGTTTCAACAAGGACAAGAAGGAGCTTGATGCTGATGTTCACCGCAGATATATCTTTGGTGGCCATACTATGATGGAAGATGAACCTGAGAAATACCAGTCGCATTTCAGTGAATATCTCAAGCGAGGATTAGAGCCTGATGGTCTTGAGGAGATGTACAAGAAGGTCCATGCTGCCATTCGTGCAGATCCGACAGTGAAGAAATCAGAGAAGGAACAGCCTAAGGAGCACAAGAGGTTCAACTTGAAGAAGCTGACCTATGAAGAGAGGAAGGCCAAGTTAGTTGCACGGTTGCAGGCTCTCAACTCAGCTGCTGGTGATGATGAGGATGACGACGAGTGA 702 0.4473 MAYVKAQKSKAYFKRYQVKFKRRRGNIAIYQEGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKNIIAQITSASIAGDIVLAAAYAHELPRYGLEVGLTNYAAALDGGLDIPHSDKRFAGFNKDKKELDADVHRRYIFGGHTMMEDEPEKYQSHFSEYLKRGLEPDGLEEMYKKVHAAIRADPTVKKSEKEQPKEHKRFNLKKLTYEERKAKLVARLQALNSAAGDDEDDDE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0929 233 Gene3D - 106 225 - -
Lele44g0929 233 Gene3D - 1 105 - -
Lele44g0929 233 PANTHER RIBOSOMAL PROTEIN L5-RELATED 1 105 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lele44g0929 233 Pfam Ribosomal large subunit proteins 60S L5, and 50S L18 14 165 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lele44g0929 233 PRINTS Ribosomal protein L5 signature 50 69 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lele44g0929 233 PRINTS Ribosomal protein L5 signature 27 46 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lele44g0929 233 PRINTS Ribosomal protein L5 signature 91 111 IPR005485 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Lele44g0929 233 SUPERFAMILY Translational machinery components 11 186 - -
Lele44g0929 233 CDD Ribosomal_L18_L5e 48 105 - -
Lele44g0929 233 Pfam Ribosomal L18 C-terminal region 169 222 IPR025607 -
Lele44g0929 233 MobiDBLite consensus disorder prediction 184 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0929 Lele-ChrLele44 17980503 17982826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0929 1 226 Cytoplasmic Ribosomal Protein Gene Family AT5G39740 51.839 1.62e-90 267