Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0923 ATGCTGCTGGGGCAAGCACCTCCTGTTAGCTTCAGAACCAAACCCAATTGCTTGGAATTGCAGATTCAAAGTCATGAGCGTCTCTTTTCCGTTGCTCAGACTTGTTTCTGTGACACCCCATGTACGAAAATGCTGCGCACAAGTGTTGGGAATGCATTTCTCGTCAGAGCTGGGCGTTCTCCTACACCCAAAGACGTTCTTTCTTGGAACCCTAACCCCGCCAACGATGCTTTGAGCTCGAATGTAGAGAGTTCATCAGATATAAGCATTGTAACTGAAGGCTTTGAGCGTGACTCGGTTATTACAAATAGTGATTCTAGAATAAAATCTAAGGGGAGGTTATCTGGAAATTTTGGCAAGCTGAAAGCACAGAAAGTCAAGGCCCTCATCCACAGAACTATTCACAAGAAGCAGGAAAGAAGCATTAATGATGATAACCTAGTTGTAGAACATCCAGAATTAGGAATAGAAGATGATTGGGAACAATCTGAGGGATCTGGTTCTCACGTAGGATACCAGAACACACCCAATAAATCTCGAAACAATGACAACAGAATAGAGAGTTCAGGTATATTAGTTGAAAGGCATTCTACCTCTCGTTCAAAAGGATGGGGCGGTGGAGAATCTTCACGTACCTTTAAGACTGAATCACAAAAACTGGTAAAGGAACAAAGAAAACCATTGTCTGACAGTGACTTTTTCAGTCGAAAGTCCTTCAAAGATCTTGGGTACAGTGAATATATGATTGAATCTCTGGGAAAGCAATTTTATCGAAGGCCTTCAAATATACAGGCCATGGCATTTGAACCAGTATATACTGGAAAGAGTTGTATAATAGCTGATCAAAGTGGTTCTGGAAAGACTCTAGCATATCTTGCACCAATAATTCAGAAGCTTAGACAAGAAGAATTGGAAGGACTTGCCAATTCCTCTTCACAAGCCCCTAGAGTGGTTATATTGGCTCCAACAGCTGAGTTGGCTTCTCAGGTGTTAGCTAATTGTAGATCAATGTCAAAATCTGGGGTTCCATTCAAATCTATGGTTGTAACAGGCGGCTTTCGACAGAGAACTCAACTGGAGAATTTAGAGCAGGGTGTTGATGTTTTATTAGCAACACCTGGCCGTTTTATGTTCCTCATCAAGGAAGGCTTCTTGCAGTTAACGAATTTAAGATGTGCGGTCTTGGATGAGGTAGATATACTTTTTGGTGATGAAGATTTTGAAGTGTCGCTTCAATGTTTGATTAATTCTTCACCAGTTACCACACAATATTTATTTGTGACTGCAACTTTACCAAAAGATATTTACAATAAACTAGTTGAAGTTTTTCCTGATTGTGGAGTGATCATGGGACCTGGTATGCACCGGATAAGCTCTCGACTTGAGGAGGTTCTAGTTGATTGCAGTGGAGCTGATGGGGAAGAAAAATCCCCCGATACAGCATTTCTTAATAAGAAAACAGCTCTTCTACAGATTGCAGAAGCAAGTCCTGTCCCAAAAACCATTGTCTTCTGCAACAAAATTGAAACTTGCAGAAAAGTTGAGAATGCGTTGAAGCGTTTTGATAGGAAAGAGACTCGCGTACAAGTTCTACCTTTCCATGCTGCTATGACACAGGAATTACGGCTTGCTAATATGGAAAAGTTTACACGTTCTCAACCAAAGGAAGTCTCCCAGTTTCTGGTTTGCACAGACAGAGCTTCACGCGGGATTGACTTCACCGGAGTGGATCATGTTATACTTTTCGACTTCCCACGTGATCCGAGTGAATATGTGCGCCGTGTCGGAAGAACTGCAAGAGGTGCTTCTGGAAAGGGCAAGGCATACATCTTTGTGGTTGGCAAGCAAGTATCACTTGCACGTAAAATCATGGATAGAAATAGGAAGGGTCATCCTCTTCACGATGTGCCTTCTGCCTATGAGCTCATGAAGTAG 1935 0.4212 MLLGQAPPVSFRTKPNCLELQIQSHERLFSVAQTCFCDTPCTKMLRTSVGNAFLVRAGRSPTPKDVLSWNPNPANDALSSNVESSSDISIVTEGFERDSVITNSDSRIKSKGRLSGNFGKLKAQKVKALIHRTIHKKQERSINDDNLVVEHPELGIEDDWEQSEGSGSHVGYQNTPNKSRNNDNRIESSGILVERHSTSRSKGWGGGESSRTFKTESQKLVKEQRKPLSDSDFFSRKSFKDLGYSEYMIESLGKQFYRRPSNIQAMAFEPVYTGKSCIIADQSGSGKTLAYLAPIIQKLRQEELEGLANSSSQAPRVVILAPTAELASQVLANCRSMSKSGVPFKSMVVTGGFRQRTQLENLEQGVDVLLATPGRFMFLIKEGFLQLTNLRCAVLDEVDILFGDEDFEVSLQCLINSSPVTTQYLFVTATLPKDIYNKLVEVFPDCGVIMGPGMHRISSRLEEVLVDCSGADGEEKSPDTAFLNKKTALLQIAEASPVPKTIVFCNKIETCRKVENALKRFDRKETRVQVLPFHAAMTQELRLANMEKFTRSQPKEVSQFLVCTDRASRGIDFTGVDHVILFDFPRDPSEYVRRVGRTARGASGKGKAYIFVVGKQVSLARKIMDRNRKGHPLHDVPSAYELMK 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0923 644 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 271 613 IPR027417 -
Lele44g0923 644 MobiDBLite consensus disorder prediction 158 224 - -
Lele44g0923 644 Gene3D - 197 446 IPR027417 -
Lele44g0923 644 SMART ultradead3 256 464 IPR014001 -
Lele44g0923 644 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 268 449 IPR014001 -
Lele44g0923 644 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 237 265 IPR014014 GO:0003724
Lele44g0923 644 Gene3D - 471 635 IPR027417 -
Lele44g0923 644 MobiDBLite consensus disorder prediction 166 214 - -
Lele44g0923 644 CDD DEADc 248 437 - -
Lele44g0923 644 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 169 641 - -
Lele44g0923 644 CDD SF2_C_DEAD 485 612 - -
Lele44g0923 644 Pfam Helicase conserved C-terminal domain 487 601 IPR001650 -
Lele44g0923 644 Pfam DEAD/DEAH box helicase 262 435 IPR011545 GO:0003676|GO:0005524
Lele44g0923 644 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 484 644 IPR001650 -
Lele44g0923 644 SMART helicmild6 512 602 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0923 Lele-ChrLele44 17912652 17920434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0923 238 623 Eukaryotic Initiation Factors Gene Family AT3G19760 27.692 4.02e-29 118