Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0896 ATGAAAATCGTAGTGTCGAAGATTGATTCATGGAGTCCTATTATTAGTACAGATAATAATATCAGAAAAGAAAACAGAACTGTCAAAAGAAAGGAGTTTGTGTGGAGGTCTATGAAGAAGAAGAAGAAGAATGCTGCTTCAGAAAGTGGCGGTGATAACAATGGATCGTCGTCTTCATCGTCTAGGTTTACAAAGAAGAGCAAAGTAGTGTGGACGAGCGATCTTCAAAGTCGTTTCATAGAAGCCATAAATATCCTTGGGTTAGAAAATGTAGTTCCAAAAAAGATTCTTGAAGTTATGCAAACACCAGGACTGACCAGGGAAAATGTGGCAAGTCACTTGCAGATTAATAAGGATGTGTTCTCAAGAGATCACTGTTATCAAACTACTGGAGTTGAATGGAATAACAATGTTGCCTCATCACATCATGTGACATCTCATTGCTCAAACTTCTTCAGTACTGCTGGATTTGATTGTGATAATGGCAAGTTCTCTAATCAGGTTCATCAAATTCCAAGATGTTCATTTTCTGAAAACTTGGTTTCGAAAGTAATTCTGGAACATGGGAAGAAAATGCAGATTTACTCCTTGAATAGTTCTCCTCAAAACGACAAGGGAATTGAATCAGACTTTTGCTCTTCAGATGTTGAAGAGATTGATATCGGATTTGGTTTGCAATTTCTCCAGTGA 690 0.3739 MKIVVSKIDSWSPIISTDNNIRKENRTVKRKEFVWRSMKKKKKNAASESGGDNNGSSSSSSRFTKKSKVVWTSDLQSRFIEAINILGLENVVPKKILEVMQTPGLTRENVASHLQINKDVFSRDHCYQTTGVEWNNNVASSHHVTSHCSNFFSTAGFDCDNGKFSNQVHQIPRCSFSENLVSKVILEHGKKMQIYSLNSSPQNDKGIESDFCSSDVEEIDIGFGLQFLQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0896 229 FunFam Two-component response regulator 62 123 - -
Lele44g0896 229 SUPERFAMILY Homeodomain-like 64 116 IPR009057 -
Lele44g0896 229 MobiDBLite consensus disorder prediction 48 62 - -
Lele44g0896 229 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 66 116 IPR006447 GO:0003677
Lele44g0896 229 MobiDBLite consensus disorder prediction 32 62 - -
Lele44g0896 229 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 41 115 IPR044841 GO:0003700|GO:0006355
Lele44g0896 229 Pfam Myb-like DNA-binding domain 69 115 IPR001005 -
Lele44g0896 229 Gene3D - 63 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0896 Lele-ChrLele44 17215447 17224296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0896 35 115 Response Regulator Gene Family AT3G16857 51.852 8.44e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele44g0896 Myb_DNA-binding 2.1e-05 CL0123