Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0894 ATGAAAGTCTGTAGTGATGAGAAAGGTAAGAATGCTATGTTAGTTGCTCCAAATAATGGGGTCTCTTTCCCACAAGGAAAGAATTCAAATGAGAACAAGCTGGGAATACTTGGTGATGGTTTAAGCAATGGAGTGGCTAACCACTCTGTACCAAAACCCCTAGACAATGCATTGTACTCACAATGTGTGTTTGCTATGTGCACTTTAGCTAAAGATCCATCTCCACGTATTGCAAACCTTGGTCGTCGGGTGCTATCCATAATTGGTATTGAACAAGTAGTAGCAAAACCACCGAAATCTACTGGTGGTCAGACTGGTGATCCAAAACCATCTAGTCTTGCTGGTCTAGCTCGTTCGTCTTCATGGTTTGATATGAATGGAGGTCACTTACCTCTAACCTTCAGAACTCCTCCAGTCAGTCCTCCTCGCCCAAGCTACTTAACTGGAATGCGAAGAGTGTACTCTTTAGAGTTCAGGCCACACTTGATAAATTCTCCCGATTCGGGTTTAGCTGATCCACTTTTAGGTACTAGTGAAACTTCTGGGCCTTCAGATCGTAGTTTTCTTCCACAATCAACTATATATAAATGGAGTTGTGGGCACTTCTCCAAGCCACTCTTAACTGCTGCAGATGACAGTGATGAATTATTGGCTAGAAGAGAAGAGAGAGAAAATTTTGTATTGGAGCACATAGCAAAATGCCAGCACTCTGCTGTTAGCAAGCTAACGAATCCAGTTGCCAAATGGGATATAAAGGGTATTCAAAAAACATTGCTACAACCTTTCTCTCCAATAGTAATAGCTGCTGATGACAATGAACGGGTCAGTTCTACACTTTTTTGTGGTGTGTTTATGGCCGGCCTGGACTTGGGTTCTTCACAATCTCATCACTTTCTTCATCATCATCAGCTTCAACGCCCTAATTTTCAATCCAACCAAGATGATGATGATAACCACGAAGATAGTTCTAACCCTCATGAGCTTAACCCGGCTGGTCCGGGCGATGTAGTTGTTCGCCGGCCTAGGGGTAGGCCGGCCGGATCGAAGAACAAGCAGAAGCCGCCTGTGATAATCACACGCGAGAGCGCCAACGCGCTCCGAGCTCATATTCTTGAGGTTAGCAGCGGCTCCGATGTGTTTGAGTGTGTGGCGACTTATGCAAGGAGGAGACAGCGAGGGATCTGTGTTTTGAGTGGGAGCGGCACCGTCACAAACGTGACAATCCGGCAGCCATCTGCGGCGGGGGCTGTTGCGACACTTCAGGGACGGTTTGAGATACTGTCGCTGTCCGGATCTTTCTTGCCACCTCCAGCTCCACCGGGAGCGACAAGCCTCAGCGTATTTCTCGCCGGAGGGCAAGGTCAAGTGGTAGGAGGAAATGTTGTCGGCGCGTTGGTGGCGGCTGGGCCAATTATTGTGATTGCTTCTTCATTTACCAACGTAGCATATGAGAGATTGCCATTAGACAACGAGGAAGAACCCTTACCGGTCCAGAACGGTGGCAGTGCCGACAACGGCGAAGACGATGGTAGCCGAGACATGAACGGATTTCCGAACTCATCTTCTGGTCTTCCCTTCTTGAATTTGCCTGTAAACATGTCTCAGTTACCACTTAATTGGGTTGAAAATTCTTGTGGAGGAAGATCTGAGCCATATTAA 1659 0.4708 MKVCSDEKGKNAMLVAPNNGVSFPQGKNSNENKLGILGDGLSNGVANHSVPKPLDNALYSQCVFAMCTLAKDPSPRIANLGRRVLSIIGIEQVVAKPPKSTGGQTGDPKPSSLAGLARSSSWFDMNGGHLPLTFRTPPVSPPRPSYLTGMRRVYSLEFRPHLINSPDSGLADPLLGTSETSGPSDRSFLPQSTIYKWSCGHFSKPLLTAADDSDELLARREERENFVLEHIAKCQHSAVSKLTNPVAKWDIKGIQKTLLQPFSPIVIAADDNERVSSTLFCGVFMAGLDLGSSQSHHFLHHHQLQRPNFQSNQDDDDNHEDSSNPHELNPAGPGDVVVRRPRGRPAGSKNKQKPPVIITRESANALRAHILEVSSGSDVFECVATYARRRQRGICVLSGSGTVTNVTIRQPSAAGAVATLQGRFEILSLSGSFLPPPAPPGATSLSVFLAGGQGQVVGGNVVGALVAAGPIIVIASSFTNVAYERLPLDNEEEPLPVQNGGSADNGEDDGSRDMNGFPNSSSGLPFLNLPVNMSQLPLNWVENSCGGRSEPY 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0894 552 ProSiteProfiles PPC domain profile profile. 363 501 IPR005175 -
Lele44g0894 552 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 308 507 IPR014476 GO:0003680
Lele44g0894 552 MobiDBLite consensus disorder prediction 308 355 - -
Lele44g0894 552 SUPERFAMILY AF0104/ALDC/Ptd012-like 363 496 - -
Lele44g0894 552 CDD DUF296 367 450 IPR005175 -
Lele44g0894 552 FunFam AT-hook motif nuclear-localized protein 366 493 - -
Lele44g0894 552 MobiDBLite consensus disorder prediction 490 521 - -
Lele44g0894 552 Pfam Plants and Prokaryotes Conserved (PCC) domain 367 480 IPR005175 -
Lele44g0894 552 Gene3D - 366 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0894 Lele-ChrLele44 17183461 17194175 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0894 337 552 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 68.664 6.36e-85 263