Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0882 ATGCTTTGGGAGGATCTATCCAACATGGTTTTAAGTGCTACGAGTATAAAATTAGACTCACCATGCATGTTGGAGCAGGTAATGCTACCAGTGGGAACTGGTTTTTTAGCAATATGGTTGATCCAAATTATAATAGAAAGTGTGGAACTGATGAGGAAGAAGAAGAAGAACAAGGTCTCAGAACAGAACACAGAGATTCTTCATCCCACTGTGCTGAAGTATGGTTTAGCTTACAAAACCAGTATATTTTGCAGCACTTTACTGCTTGCAATTCATATCTTGTTGCTTCTGATGATGGTAAAAGTTCAAACTCAGTGCAATTCAAAACTTATGGCTTTTACATCAGAAACAATTATGGTATTAGTATGGACAATTGCATTGGTAACAGTGTGGAAGATTCCAAAAATCAATGTTAAGTTCCCTTTGATGCTAAGATCATGGTGGATTTGCGGCTTCTTTTTGTGTATTATCAACTTAGGGTTTCATAGCCATTTCAATATCAGCAAACGGACACAGATTGGATTTAGGGAATATGCAGATTTTCTTGGCTTGCTTGCTTCAACGGTTCTATTGGGAATTTCAATAAGGGGAAGAACTGGGATTGTGGTGATTGCCACAGATGGAATCTCTGAGCCACTTTTGAGGGAGAAAACTGGAAAAGATTCAGAATCTTCCAAAAGGGAATCTTTATATGGGAAATCTACTTTCATTCAACTCATTACTTTTTCATGGCTCAATCCTTTGTTTGCAGTAGGGTATAAAAAAGCTCTTGAACAGAGTGATATTCCTGACGTTGCCATTGAGGATTCTGCAGATTTTCTATCTTCATGCTTTGATGAGAGCCTAAGAAAAGTCAAGGAAGCCGATGGAACCACAAATCCATCTGTTTACAAAGCAATCTATCTATTTGCTAGGAAGAAGACTCTGATCAATGCATGTTTTGCAGTAGTAAGCGCTGCAGCATCGTATGTTGGCCCATACCTAATCACTGACTTTGTGAGTTTCCTCGCCGATAAGGGAACCCGCGGGTTGAATGAAGGATACTTATTGTCTCTTGGATTCTTATGTGCCAAAATGATCGAGACAATAACTCAGAGGCAATGGATTTTTGGTGCTCGCCAAGCGGGTCTTCGCCTTAGAGTGGCGTTGATGTCACACATATACAAGAAGGGCTTAAATCTGTCTAGTAAATCGCGGCAAAGTCACAGCGGTGGTGAGATCATGAATTATATGAGCGTAGATGTGCAGAGAATCACAGATTTCATGTATTTCATAAATGTCATATGGATGCTTCCGGTGCAAGTAACATTAGCGGTCTACATTTTGCACACGAATCTCGGTTTGGGTTCGTTGGCTGCGCTAGCTGCTACTCTAATAGTTATGGGTTTGAACATACCTCTTACAAGAATACAGAAAAGATACCAATCTAAGATCATGGATGCTAAGGATAATAGGATGAAAGCCACATCAGAAGTTCTCAGAAACATGAAGACTTTGAAACTTCAAGTTTGGGATACCGAATTCCAGCACAGGTTAGAAGAACTGAGGGAAACAGAATCCATCTGGTTATGGAAGTCACTAAGGCAAGGAGCATTTGCTGCTTTTATCTTCTGGGGATCACCCACATTCATTTCCTTGGTAACCTTCTGGGCATGCATCTTTATGGGGGTTGAACTAACAGCCGGAAGAGTTTTATCCGCATTTGCCACGTTTCGGATGTTACAGGATCCTATATTTAACTTGCCTGATTTACTCAATGTAATTGCTCAAGGGAAAGTTTCAGTAGATAGAATTGCTTCTTATCTCAGGGAGGAAGAAGTTCAACATAATTCCATTGAGAATGTTCCAAGGGACCAAACAGAGTTTGATGTAGTTATTGAAAAAGGAAGATTCAGTTGGGATTCTGAGCCAAGCAATCCAACACTTGATGGAATAGATTTAAGAGTCAAAAGAGGAATGAAGGTGGCGATTTGCGGGACCGTAGGTTCCGGAAAGTCTAGCCTACTTTCCGGCATTCTGGGCGAAATGTATAAGCAATGCGGGACCGTGAAGATCAGTGGATCGAAAGCTTATGTTCCACAATCACCATGGATATTGACTGGAAACTTTAGGGACAATGTTACCTTTGGAAAGGAATTCAATAGTGTAAAGTATGAGAAGACTATTGAAGCATGTGCATTGATAAAGGACTTTGAGTTATTTTCCCATGGTGACCTGACAGAGATTGGAGAAAGAGGGATCAACATTAGTGGAGGACAGAAGCAAAGGATACAAATAGCTCGTTCGGTTTATCAAGACGCCGACATATATCTCTTTGATGACCCTTTTAGTGCTGTTGATGCTCATACCGGAAGCCACCTATTCAAGGAGTGCCTTATGGGAGTTCTTAGAGAAAAAACTATACTTTATGTTACCCATCAAGTGGAGTTTCTTCCAGCAGCGGACCTTATTCTGGTGATGCAAAATGGAAGGATTGCACAAGCTGGAACTTTTGAACAACTTCTAAAGCAAAATATTGGATTTGAAGTTTTAGTTGGAGCTCATAGCCAAGCTCTGGAGTCAATTCTAATGGTTGAGAATTCAAGCAGAACAACTCTAAACCCGGCACCTGAAGGTGAACCAAATGTCAATTCTCAGTCAAAATCAGAACTTTCTCACACTCAACATAACAACACAGAGCAAGGAAATCCCCCAGAGATCAAAGAGAAAGAAGGTAAACTTATGCAAGATGAAGAAAGAGAAAGAGGAAGCATTTCTAAAGAAGTTTACTGGTCATATTTAACCACTGTCAAAGGGGGTGCCATAGTTCCTTTAATACTTTTGGCTCAATCTTCATTCCAAGTACTTCAGGTTGCAAGTAACTATTGGATGGCTTGGGTTTGCCCTTCATCAAGTGATGCTAAGCCCACATTTGACATGGATTTCATACTTCTTGTTTATATGGCACTTTCTATTGGGAGTGCACTTTGTGTTCTCCTAAGAGCCATATTAGTAGCAAAAACTGGACTTTGGACTGCACAAAAACTATTTATCAATATGTTGCATAGTATTCTTCGAGCACCGATGTCATTTTTCGATTCAACTCCAAATGGCAGAATTTTGAACAGGGCCTCCACAGATCAAAGTGTGCTAGACTTGGAAATGGCAACCAAATTAGGGTGGTGTGCTTTCTCAATAATACAGATGCTAGGTACCATTGCAGTAATGTCACAGGTGGCATGGCAAGTATTTGTCATCTTCCTTCCCGTAACTGCGATCTGCGTTTGGTATCAAAGATACTATACACCAACAGCAAGAGAACTGGCTCGCTTGTCACAAATACAGATAGCTCCAATTCTGCATCATTTTGCAGAATCGTTAGCAGGAGTAGCATCGATTCGAGCTTTCGATCAAGAAAGCCGTTTTGTATATTCAAATCTTGATCTTGTTGACAACTACTCAAAACCATGGTTCCATAATGTATCTGCAATGGAATGGCTTTCTTACAGATTGAATTTACTATCCAATTTTGTTTTCGCCTTCTCTCTGGTTTTGCTTGTAGTCCTCCCAGAAGGAATCATCAATCCAAGCATTGCAGGGTTGGCAGTAACTTATGGGATCAATTTGAATGTACTGCAAGCTTCAGCGATATGGAACATGTGTAATGCAGAAAATAAGATGATATCTGTTGAAAGAATCATTCAATACTCAAATCTCAAAAGTGAAGCAGCTCTTGTTATTGAAGATTCTAGGCCACCAAACAACTGGCCTGAAATTGGAACAATATGTTTCAATAACCTGCAGATACGTTATGCTGAACATCTACCATCTGTTCTGAAGAACATCAATTGCACATTTCCCGGAAGGAAGAAAATCGGTGTGGTGGGACGAACCGGCAGTGGAAAATCGACCTTAATACAGGCCATTTTCAGGGTTGTTGAACCTTGGGAAGGAAGCATTATAATTGATGATTTGGATATAAGCAAGATTGGTCTACATGACTTAAGGTTGAGACTTAGCATAATTCCACAGGATCCCACAATGTTTGAAGGCACAGTTAGAGGAAACTTGGACCCACTTGAGCAATACTCTGACAAGCAAGTGTGGGAGGCTTTGGATAAATGTCAGCTTGGTCAGCTGGTGAGATCAAAACAAGAGAAATTGCAGGCATCAGTGGTTGAAAATGGAGAAAATTGGAGTGCAGGCCAAAGGCAACTATTTTGCCTTGGAAGGGCCTTACTGAAGAAAAGTAGCATACTTGTGCTAGATGAAGCAACAGCATCAATTGATTCTGCAACTGATGGAATTCTACATAAGATCATCAGTCAAGAATTCAAAGATAGAACTGTTGTCACAATAGCCCATCGAATCCATACCGTTATCGATAGCGATTTGGTTTTGGTTCTGAGTGATGGGAAAATCGCGGAGTTTGATGCACCATCGAAGTTAATTGAAAGAGAAGATTCCTTCTTTTCTAAACTCATAAGGGAGTACTCAAGAAGATCACAGAGTTTCAACAGCTTGGCCACTCAAAATGGCCAATGA 4524 0.4036 MLWEDLSNMVLSATSIKLDSPCMLEQVMLPVGTGFLAIWLIQIIIESVELMRKKKKNKVSEQNTEILHPTVLKYGLAYKTSIFCSTLLLAIHILLLLMMVKVQTQCNSKLMAFTSETIMVLVWTIALVTVWKIPKINVKFPLMLRSWWICGFFLCIINLGFHSHFNISKRTQIGFREYADFLGLLASTVLLGISIRGRTGIVVIATDGISEPLLREKTGKDSESSKRESLYGKSTFIQLITFSWLNPLFAVGYKKALEQSDIPDVAIEDSADFLSSCFDESLRKVKEADGTTNPSVYKAIYLFARKKTLINACFAVVSAAASYVGPYLITDFVSFLADKGTRGLNEGYLLSLGFLCAKMIETITQRQWIFGARQAGLRLRVALMSHIYKKGLNLSSKSRQSHSGGEIMNYMSVDVQRITDFMYFINVIWMLPVQVTLAVYILHTNLGLGSLAALAATLIVMGLNIPLTRIQKRYQSKIMDAKDNRMKATSEVLRNMKTLKLQVWDTEFQHRLEELRETESIWLWKSLRQGAFAAFIFWGSPTFISLVTFWACIFMGVELTAGRVLSAFATFRMLQDPIFNLPDLLNVIAQGKVSVDRIASYLREEEVQHNSIENVPRDQTEFDVVIEKGRFSWDSEPSNPTLDGIDLRVKRGMKVAICGTVGSGKSSLLSGILGEMYKQCGTVKISGSKAYVPQSPWILTGNFRDNVTFGKEFNSVKYEKTIEACALIKDFELFSHGDLTEIGERGINISGGQKQRIQIARSVYQDADIYLFDDPFSAVDAHTGSHLFKECLMGVLREKTILYVTHQVEFLPAADLILVMQNGRIAQAGTFEQLLKQNIGFEVLVGAHSQALESILMVENSSRTTLNPAPEGEPNVNSQSKSELSHTQHNNTEQGNPPEIKEKEGKLMQDEERERGSISKEVYWSYLTTVKGGAIVPLILLAQSSFQVLQVASNYWMAWVCPSSSDAKPTFDMDFILLVYMALSIGSALCVLLRAILVAKTGLWTAQKLFINMLHSILRAPMSFFDSTPNGRILNRASTDQSVLDLEMATKLGWCAFSIIQMLGTIAVMSQVAWQVFVIFLPVTAICVWYQRYYTPTARELARLSQIQIAPILHHFAESLAGVASIRAFDQESRFVYSNLDLVDNYSKPWFHNVSAMEWLSYRLNLLSNFVFAFSLVLLVVLPEGIINPSIAGLAVTYGINLNVLQASAIWNMCNAENKMISVERIIQYSNLKSEAALVIEDSRPPNNWPEIGTICFNNLQIRYAEHLPSVLKNINCTFPGRKKIGVVGRTGSGKSTLIQAIFRVVEPWEGSIIIDDLDISKIGLHDLRLRLSIIPQDPTMFEGTVRGNLDPLEQYSDKQVWEALDKCQLGQLVRSKQEKLQASVVENGENWSAGQRQLFCLGRALLKKSSILVLDEATASIDSATDGILHKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGKIAEFDAPSKLIEREDSFFSKLIREYSRRSQSFNSLATQNGQ 1507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0882 1507 CDD ABC_6TM_ABCC_D1 310 598 IPR044746 GO:0140359
Lele44g0882 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 938 1218 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele44g0882 1507 Pfam ABC transporter 1272 1420 IPR003439 GO:0005524
Lele44g0882 1507 CDD ABC_6TM_ABCC_D2 936 1230 IPR044726 GO:0140359
Lele44g0882 1507 Gene3D - 1237 1491 IPR027417 -
Lele44g0882 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 620 847 IPR003439 GO:0005524
Lele44g0882 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1246 1485 IPR027417 -
Lele44g0882 1507 FunFam ABC transporter C family member 10 292 606 - -
Lele44g0882 1507 Gene3D - 622 853 IPR027417 -
Lele44g0882 1507 MobiDBLite consensus disorder prediction 896 913 - -
Lele44g0882 1507 SUPERFAMILY ABC transporter transmembrane region 924 1235 IPR036640 GO:0005524|GO:0016020
Lele44g0882 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 618 840 IPR027417 -
Lele44g0882 1507 Pfam ABC transporter 642 776 IPR003439 GO:0005524
Lele44g0882 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1255 1489 IPR003439 GO:0005524
Lele44g0882 1507 CDD ABCC_MRP_domain2 1253 1473 - -
Lele44g0882 1507 SMART AAA_5 1281 1473 IPR003593 -
Lele44g0882 1507 SMART AAA_5 651 824 IPR003593 -
Lele44g0882 1507 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 233 1492 - -
Lele44g0882 1507 MobiDBLite consensus disorder prediction 864 895 - -
Lele44g0882 1507 SUPERFAMILY ABC transporter transmembrane region 305 606 IPR036640 GO:0005524|GO:0016020
Lele44g0882 1507 Gene3D ABC transporter type 1, transmembrane domain 283 607 IPR036640 GO:0005524|GO:0016020
Lele44g0882 1507 Gene3D ABC transporter type 1, transmembrane domain 899 1236 IPR036640 GO:0005524|GO:0016020
Lele44g0882 1507 MobiDBLite consensus disorder prediction 864 913 - -
Lele44g0882 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 309 590 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele44g0882 1507 Pfam ABC transporter transmembrane region 947 1182 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele44g0882 1507 Pfam ABC transporter transmembrane region 309 573 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele44g0882 1507 FunFam ABC transporter C family member 3 1238 1490 - -
Lele44g0882 1507 FunFam ABC transporter C family member 5 899 1236 - -
Lele44g0882 1507 ProSitePatterns ABC transporters family signature. 749 763 IPR017871 GO:0005524|GO:0016887
Lele44g0882 1507 CDD ABCC_MRP_domain1 624 824 - -
Lele44g0882 1507 FunFam ABC transporter C family member 5 609 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0882 Lele-ChrLele44 16778533 16788532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0882 607 898 Calmodulin-binding Proteins AT2G36910 27.419 2.43e-23 106