Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0876 ATGGCCTCCTCCTTCCTCACTCTCCCAAAACATTTTCTTTTCCCGCCTAAGGCTACCTTCTCTTCCTCTGACCGCAAACTTGCAGGTTTGCGGAAGAACTCGTTGAGGGTTAATGCAATTGTGAAGAAATTTGAAGGGACAAAGGTGGTTCCGCAGGCTGACAGAGTTCTTGTTCGTTTGGATGAGCTTGAACAAAAAACTACTGGTGGAGTTTTGTTGCCAAAGTCAGCTGTGAAGTTTGAGCGATATCTCATGGGAGAAATTCTTTCTGTTGGTGCAGATGTTCAAGAAGTAGAGGCAGGCAAGAAGGTTTTATTCTCAGATATGAGTGCTTATGAGGTGGATTTGGGGACTGATGCAAAGCACTGCTTCTGTAAAGCAAGTGATTTATTGTCTGTCGTTGAGTAG 408 0.4436 MASSFLTLPKHFLFPPKATFSSSDRKLAGLRKNSLRVNAIVKKFEGTKVVPQADRVLVRLDELEQKTTGGVLLPKSAVKFERYLMGEILSVGADVQEVEAGKKVLFSDMSAYEVDLGTDAKHCFCKASDLLSVVE 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0876 135 FunFam 10 kDa chaperonin 44 135 - -
Lele44g0876 135 Gene3D GroES chaperonin 43 135 IPR037124 GO:0006457
Lele44g0876 135 SMART Cpn10_2 48 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele44g0876 135 CDD cpn10 48 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele44g0876 135 PRINTS 10kDa chaperonin signature 49 64 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele44g0876 135 PRINTS 10kDa chaperonin signature 99 111 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele44g0876 135 PRINTS 10kDa chaperonin signature 121 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele44g0876 135 PRINTS 10kDa chaperonin signature 73 94 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele44g0876 135 SUPERFAMILY GroES-like 48 135 IPR011032 -
Lele44g0876 135 PANTHER 10 KDA HEAT SHOCK PROTEIN 47 133 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele44g0876 135 Pfam Chaperonin 10 Kd subunit 48 134 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0876 Lele-ChrLele44 16656206 16659927 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0876 47 135 Calmodulin-binding Proteins AT5G20720 33.673 1.86e-10 55.1