LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele44g0862	ATGCTGTTGAACGATGCAGTGTTAGCAATTGGAGGCTTTGAACTTGCATGCATCTTTCTCTTTTGGTGTCTGACATGGCAAAAGTCAAGTAAGCAGCAGAATTACGATCATCTTACTGGAACTGGGTTCAGAAAATACAGCTACTCTGAGTTGAAAGAAGCAACAAGAGGTTTCAGTGAAGAGATTGGAAGGGGTGCTGGAGGAATCGTATACAAGGGAACACTAAAAGATGGGCGAGTTGCTGCAATCAAGAGACTCAACGAAGCAAATCAAATAGAAAGCGAGTTTCTCGCAGAAGTCAACTTAATAGGAAGGCTGAACCACATGAACTTGATTGACATGTGGGGGTATTGTGCAGAAGGAAAGTACAGAATGTTGGTGTATGAGTACATGGAAAACGGTTCTTTGGCAGAAAACCTCGAATCCAACAAGTCCCTTGATTGGAGAAAGAGATATGAAATCGCTCTTGGAACAGCAAGAGGACTTGCATATCTTCACGAAGAATGCTTAGAGTGGGTTTTGCATTGTGACATAAAGCCTCAAAACATACTTTTGGATTCAGATTATAAGCCCAAGGTTGCAGATTTTGGATTGTCGAAATTGCAGAACAGAAACGACCTCAACAATCCAAGTTTCTCAACAATAAGAGGAACAAGAGGATATATGGCACCAGAATGGGTTTTCAATCTACCAATAACTTCCAAAGTTGATGTTTACAGTTATGGAGTTGTAGTGTTGGAGATGATAACAGGAAAAAGCTTGAGGGTGGATGGACCAGATCACTCGCATCATGGGAGGCTAGTGACATGGGTGAGAGACAAGAAGAACAAAGGAGAAGGAAAGGCATCATGGGTGGAACAGATTGTGGATCCTACTGTTGAGGGAAGCTTTGAGATGAGGAAGATGGAGGTTTTGATAACAGTGGCATTACAGTGTGTTGTGGAGGACAAGGATGCGAGACCTTCAATGAGTCGCATAGTGGAGATGCTTCAAAGTCATGAAATTGAGTATTGA	1014	0.4221	MLLNDAVLAIGGFELACIFLFWCLTWQKSSKQQNYDHLTGTGFRKYSYSELKEATRGFSEEIGRGAGGIVYKGTLKDGRVAAIKRLNEANQIESEFLAEVNLIGRLNHMNLIDMWGYCAEGKYRMLVYEYMENGSLAENLESNKSLDWRKRYEIALGTARGLAYLHEECLEWVLHCDIKPQNILLDSDYKPKVADFGLSKLQNRNDLNNPSFSTIRGTRGYMAPEWVFNLPITSKVDVYSYGVVVLEMITGKSLRVDGPDHSHHGRLVTWVRDKKNKGEGKASWVEQIVDPTVEGSFEMRKMEVLITVALQCVVEDKDARPSMSRIVEMLQSHEIEY	337

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele44g0862	337	PANTHER	OS07G0415500 PROTEIN	9	332	-	-
	Lele44g0862	337	FunFam	Serine/threonine-protein kinase	131	337	-	-
	Lele44g0862	337	Pfam	Protein kinase domain	59	328	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele44g0862	337	Gene3D	Phosphorylase Kinase; domain 1	22	130	-	-
	Lele44g0862	337	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	173	185	IPR008271	GO:0004672\|GO:0006468
	Lele44g0862	337	CDD	STKc_IRAK	62	331	-	-
	Lele44g0862	337	Gene3D	Transferase(Phosphotransferase) domain 1	131	336	-	-
	Lele44g0862	337	ProSitePatterns	Protein kinases ATP-binding region signature.	62	84	IPR017441	GO:0005524
	Lele44g0862	337	FunFam	S-receptor-like serine/threonine-protein kinase	25	130	-	-
	Lele44g0862	337	SUPERFAMILY	Protein kinase-like (PK-like)	33	331	IPR011009	-
	Lele44g0862	337	SMART	serkin_6	56	330	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele44g0862	337	ProSiteProfiles	Protein kinase domain profile.	56	336	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele44g0862	Lele-ChrLele44	15206440	15208497	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele44g0862	1	331	Receptor kinase-like Gene Family	AT5G45780	36.735	2.08e-69	225

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Lele44g0862		Pkinase	3.5e-53	CL0016